CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0148400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os07g0148400 AK059593.1 - Conserved hypothetical protein 6e-1 At1g54470 RPP27 (resistance to Peronospora parasitica 27) S.X. H.G.
0.55 73.7 Os02g0190200 AK064769.1 - Conserved hypothetical protein 1e-7 At3g28345 ABC transporter family protein S.X. H.G.
0.50 68.0 Os08g0378800 AK073371.1 - Sterile alpha motif homology 2 domain containingprotein 1e+0 At4g39330 CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) S.X. H.G.
0.42 53.9 Os12g0404400 AK101768.1 - Conserved hypothetical protein 7e-1 At1g47495 unknown protein S.X. H.G.
0.31 34.5 Os11g0452400 AK073190.1 - Conserved hypothetical protein 1e-2 At4g10970 unknown protein S.X. H.G.
0.13 8.2 Os03g0305700 AK073807.1 - Peptide chain release factor 2 5e-24 At1g56350 peptide chain release factor, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
91.4 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
6.4 97.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.4 97.2 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
6.1 97.1 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.7 96.9 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.5 96.8 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
5.5 96.8 GSM302923 seedling_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
5.5 96.8 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.5 96.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.2 96.7 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 9e-14 81 Os07g0510800 AK058358.1 - RNA-directed DNA polymerase (Reversetranscriptase) domain containing protein 1e-1 At5g07600 oleosin / glycine-rich protein C.G. S.X.
0.03 6e-12 75 Os02g0272800 AK120543.1 - Hypothetical protein 3e+0 At1g13270 MAP1C (METHIONINE AMINOPEPTIDASE 1B) C.G. S.X.
0.01 8e-2 42 Os06g0266000 AK105495.1 - Conserved hypothetical protein 1e+0 At4g24590 unknown protein C.G. S.X.
0.01 8e-2 42 Os08g0210300 AK064592.1 - Hypothetical protein 9e-1 At4g03175 protein kinase family protein C.G. S.X.
0.01 8e-2 42 Os11g0425300 AK060683.1 - Conserved hypothetical protein 9e-1 At2g41530 SFGH (S-FORMYLGLUTATHIONE HYDROLASE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 6e-1 38 Arabidopsis thaliana At1g54470 841889 RPP27 (resistance to Peronospora parasitica 27) Encodes a Cf-like gene in Arabidopsis that confers downy mildew resistance to several isolates of Peronospora parasitica. - - - C.G. S.X.
0.01 2e-1 40 Glycine max HgAffx.6844.1.S1_at CB825367 - - 3e-1 At5g43450 2-oxoglutarate-dependent dioxygenase, putative C.G. S.X.
0.01 3e-1 38 Hordeum vulgare Contig15751_at Contig15751 - - 1e-1 At1g54410 dehydrin family protein C.G. S.X.
0.01 1e-3 48 Populus trichocarpa PtpAffx.213652.1.S1_at pmrna26663 GRAS family transcription factor - 2e-1 At1g55580 LAS (Lateral Suppressor) C.G. S.X.
0.01 3e-3 46 Triticum aestivum TaAffx.63968.1.A1_at BJ322225 - - 1e+0 At1g70170 MMP (MATRIX METALLOPROTEINASE) C.G. S.X.
0.01 5e-2 40 Vitis vinifera 1608586_at CF514688 hypothetical protein LOC100241814 - 4e-18 At4g21960 PRXR1 C.G. S.X.
0.01 5e-3 44 Zea mays Zm.8655.1.A1_at BM075075 - - 5e+0 At4g14540 NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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