CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0122400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os07g0122400 AK066848.1 - TPR repeat containing protein 3e-8 At4g37210 tetratricopeptide repeat (TPR)-containing protein S.X. H.G.
0.83 95.8 Os01g0867200 AK101243.1 - WD40-like domain containing protein 3e+0 At4g37720 ATPSK6 (PHYTOSULFOKINE 6 PRECURSOR) S.X. H.G.
0.50 68.0 Os02g0168900 AK102098.1 - Conserved hypothetical protein 2e+0 At1g35880 - S.X. H.G.
0.38 46.9 Os11g0311300 AK122064.1 - 3' exoribonuclease domain containing protein 3e+0 At3g50250 unknown protein S.X. H.G.
0.21 17.9 Os09g0453500 AK103120.1 - Spectrin repeat containing protein 9e-1 At4g37130 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.14 9.3 Os08g0531200 AK120362.1 - WD40-like domain containing protein 4e-4 At2g47450 CAO (CHAOS) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.5 98.1 GSM409430 9311_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
10.5 98.1 GSM409433 9311_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
9.9 98.0 GSM409434 9311_young panicle 2cm, biological rep5 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
8.5 97.7 GSM409431 9311_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
7.4 97.5 GSM409428 Nipponbare_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
7.3 97.5 GSM409432 9311_young panicle 2cm, biological rep3 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
7.1 97.4 GSM409422 Nipponbare_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
7.0 97.4 GSM409429 Nipponbare_young panicle 2cm, biological rep5 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
6.1 97.1 GSM195224 Suspension cell GSE7951 Genome-wide gene expression profiling of rice stigma
5.3 96.7 GSM409421 Nipponbare_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.56 0 2763 Os03g0722500 AK099926.1 - Glycoside hydrolase, family 17 protein 1e-3 At2g16230 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds C.G. S.X.
0.11 1e-67 260 Os03g0227400 NM_187621.1 - Glycoside hydrolase, family 17 protein 7e-4 At3g46570 glycosyl hydrolase family 17 protein C.G. S.X.
0.06 8e-38 161 Os03g0669300 AK120399.1 - Beta-1,3-glucanase-like protein 4e+0 At2g39640 glycosyl hydrolase family 17 protein C.G. S.X.
0.02 4e-9 65 Os06g0131500 AK109675.1 - Glycoside hydrolase, family 17 protein 3e-3 At1g32860 glycosyl hydrolase family 17 protein C.G. S.X.
0.01 9e-7 57 Os10g0160100 AK073394.1 - Glycoside hydrolase, family 17 protein 1e-2 At5g42100 ATBG_PAP C.G. S.X.
0.01 3e-6 56 Os05g0443400 AK072943.1 - Glycoside hydrolase, family 17 protein 3e-4 At5g42100 ATBG_PAP C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 3e-8 61 Arabidopsis thaliana At4g37210 829875 tetratricopeptide repeat (TPR)-containing protein F:binding;P:biological_process unknown;C:cellular_component unknown;MFOPBVA - - - C.G. S.X.
0.03 7e-10 67 Glycine max Gma.8371.1.S1_at CD399193 - - 1e-14 At4g34480 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds C.G. S.X.
0.32 1e-98 361 Hordeum vulgare Contig8194_at Contig8194 - - 2e-7 At4g37210 tetratricopeptide repeat (TPR)-containing protein C.G. S.X.
0.01 2e-3 46 Populus trichocarpa PtpAffx.208785.1.S1_at pmrna17413 hypothetical protein - 8e-6 At1g77780 glycosyl hydrolase family 17 protein C.G. S.X.
0.27 1e-99 365 Triticum aestivum Ta.17201.1.S1_at CA618760 - - 3e-4 At4g37210 tetratricopeptide repeat (TPR)-containing protein C.G. S.X.
0.06 6e-16 85 Vitis vinifera 1615876_at CF513558 hypothetical protein LOC100248980 - 4e-12 At4g37210 tetratricopeptide repeat (TPR)-containing protein C.G. S.X.
0.23 1e-48 194 Zea mays Zm.7707.1.S1_a_at CK985938 Hypothetical protein LOC100193555 - 1e-2 At4g37210 tetratricopeptide repeat (TPR)-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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