CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0115200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os07g0115200 AK111404.1 - Conserved hypothetical protein 3e+0 At3g57500 unknown protein S.X. H.G.
0.50 68.0 Os04g0494100 AB096140.1 - Endochitinase A precursor (EC 3.2.1.14) (Seedchitinase A) 1e-1 At2g43590 chitinase, putative S.X. H.G.
0.44 58.1 Os11g0118400 AK067579.1 - Hypothetical protein 4e-33 At1g16820 vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related S.X. H.G.
0.44 58.1 Os04g0493400 AB003194.1 - Endochitinase A precursor (EC 3.2.1.14) (Seedchitinase A) 4e-2 At3g54420 ATEP3 S.X. H.G.
0.44 58.1 Os01g0944700 AF443600.1 - Glucan endo-1,3-beta-glucosidase GII precursor (EC3.2.1.39) ((1->3)- beta-glucan endohydrolase GII)((1->3)-beta-glucanase isoenzyme GII)(Beta-1,3-endoglucanase GII) 1e-2 At5g20560 beta-1,3-glucanase, putative S.X. H.G.
0.40 51.1 Os04g0466000 AK107738.1 - Conserved hypothetical protein 6e+0 At3g21950 methyltransferase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
119.2 100.0 GSM304664 Control for the stable mutant rice line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
109.2 100.0 GSM304653 Mutant stable line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
103.7 100.0 GSM304654 Mutant stable line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
49.4 99.9 GSM304669 Control for the stable mutant rice line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
25.4 99.5 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
2.2 92.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
2.1 92.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
2.1 92.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.8 91.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.6 90.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.42 1e-130 468 Os09g0265450 9637.m00672 - - 3e+0 At3g18570 glycine-rich protein / oleosin C.G. S.X.
0.27 2e-33 145 Os04g0297800 CF327907 - Conserved hypothetical protein 4e-1 At1g53460 unknown protein C.G. S.X.
0.18 3e-29 131 Os08g0362700 9636.m02712 - - 6e+0 At5g42830 transferase family protein C.G. S.X.
0.13 1e-22 109 Os01g0780900 AU166580 - Conserved hypothetical protein 4e+0 At2g16190 - C.G. S.X.
0.11 3e-35 151 Os08g0195400 AK070464.1 - Conserved hypothetical protein 2e+0 At5g48250 zinc finger (B-box type) family protein C.G. S.X.
0.09 1e-25 119 Os03g0629800 AK071513.1 - Conserved hypothetical protein 2e+0 At4g09270 unknown protein C.G. S.X.
0.09 2e-24 115 Os01g0567200 AK071488.1 - Conserved hypothetical protein 2e-1 At5g17340 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At3g57500 824917 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB - - - C.G. S.X.
0.02 1e+0 36 Glycine max GmaAffx.73533.1.S1_at BM095104 - - 4e-15 At5g19180 ECR1 (E1 C-terminal related 1) C.G. S.X.
0.02 6e-3 42 Hordeum vulgare Contig16131_at Contig16131 - - 5e-6 At5g02570 histone H2B, putative C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.202890.1.S1_at pmrna5719 hypothetical protein - 1e+0 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
0.02 2e-1 38 Triticum aestivum TaAffx.78610.1.S1_at CA730098 - - 2e+1 At5g25080 - C.G. S.X.
0.02 8e-1 34 Vitis vinifera 1616149_x_at CF201197.1 - - 1e-11 At4g33865 40S ribosomal protein S29 (RPS29C) C.G. S.X.
0.02 1e+0 34 Zea mays ZmAffx.531.1.A1_at AI711719 - - 8e-1 At5g20370 serine-rich protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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