CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0714200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os06g0714200 BM419528 - Calcium/calmodulin-dependent protein kinasehomolog|CaM kinase homolog|MCK1 protein 8e-19 At2g46700 calcium-dependent protein kinase, putative / CDPK, putative S.X. H.G.
0.73 91.1 Os09g0281700 X59276.1 - Ras-related protein RGP1 (GTP-binding regulatoryprotein RGP1) 1e-17 At5g47960 ATRABA4C S.X. H.G.
0.71 89.6 Os01g0780500 AF225922.1 - SCAMP family protein 1e-14 At2g20840 secretory carrier membrane protein (SCAMP) family protein S.X. H.G.
0.67 87.2 Os04g0517400 AK059571.1 - Conserved hypothetical protein 5e-15 At5g18480 PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6) S.X. H.G.
0.56 76.3 Os07g0592200 AK099740.1 - Peptidase A1, pepsin family protein 2e-11 At5g43100 aspartyl protease family protein S.X. H.G.
0.53 71.3 Os06g0188000 AK066305.1 - Cyclic nucleotide-gated channel C (Fragment) 1e-11 At4g30360 ATCNGC17 S.X. H.G.
0.32 36.3 Os02g0822400 AK062258.1 - No apical meristem (NAM) protein domain containingprotein 5e-3 At5g09330 anac082 (Arabidopsis NAC domain containing protein 82) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.3 96.7 GSM100446 Rice Bala 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
4.7 96.4 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
4.2 96.0 GSM100445 Rice Bala 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
4.0 95.9 GSM154831 Root_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
3.4 95.2 GSM154829 Root_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
3.4 95.2 GSM173091 Rice OsSRT1 RNAi transgenic line LM1 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
3.3 95.1 GSM149411 Rice Bala 0ppm Arsenate (Control) Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
3.2 94.9 GSM359912 IR29 root, salt-treated, biological replicate 3 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
3.2 94.9 GSM159184 Y Leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
3.0 94.6 GSM154941 Root_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 4e-20 101 Os07g0619800 AK121343.1 - CDPK-related protein kinase (EC 2.7.1.-) (PK421) 8e-48 At3g50530 CRK (CDPK-related kinase) C.G. S.X.
0.13 8e-12 73 Os03g0366200 AK059466.1 - CaMK1 3e-14 At3g19100 calcium-dependent protein kinase, putative / CDPK, putative C.G. S.X.
0.03 5e-3 44 Os07g0515100 AK074028.1 - Calcium-dependent protein kinase, isoform 2 (EC2.7.1.-) (CDPK 2) 2e-32 At1g50700 CPK33 C.G. S.X.
0.02 5e-3 44 Os01g0622600 CB642720 - Calcium-dependent protein kinase 2e-23 At4g23650 CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6) C.G. S.X.
0.02 7e-3 44 Os03g0813100 9631.m05890 - - 3e+0 At3g55790 unknown protein C.G. S.X.
0.01 5e-3 44 Os05g0585500 AK070346.1 - Calcium-dependent protein kinase 1e-12 At4g23650 CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6) C.G. S.X.
0.01 7e-3 44 Os04g0691400 9632.m05816 - TGF-beta receptor, type I/II extracellular regionfamily protein 5e-2 At2g16835 water channel protein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 8e-19 95 Arabidopsis thaliana At2g46700 819282 calcium-dependent protein kinase, putative / CDPK, putative F:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:unknown;MOPFBVA - - - C.G. S.X.
0.09 4e-18 93 Glycine max Gma.17975.2.S1_at BQ628976 - - 2e-29 At3g50530 CRK (CDPK-related kinase) C.G. S.X.
0.37 1e-90 333 Hordeum vulgare Contig17096_at Contig17096 - - 7e-2 At5g24430 calcium-dependent protein kinase, putative / CDPK, putative C.G. S.X.
0.22 2e-29 131 Populus trichocarpa PtpAffx.210312.1.S1_at pmrna20295 CPK related kinase 4 - 1e-18 At5g24430 calcium-dependent protein kinase, putative / CDPK, putative C.G. S.X.
0.57 4e-175 615 Triticum aestivum Ta.17648.1.S1_at CA623067 - - 4e-20 At2g46700 calcium-dependent protein kinase, putative / CDPK, putative C.G. S.X.
0.28 2e-26 119 Vitis vinifera 1610570_at CA807939 hypothetical protein LOC100246879 - 2e-24 At5g24430 calcium-dependent protein kinase, putative / CDPK, putative C.G. S.X.
0.51 0 890 Zea mays Zm.42.1.S1_at D84508.1 CDPK-related protein kinase - 9e-17 At2g46700 calcium-dependent protein kinase, putative / CDPK, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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