CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0695600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os06g0695600 AK066069.1 - Zn-finger, RING domain containing protein 4e-10 At5g24870 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.55 73.7 Os01g0159300 AK073728.1 - Zn-finger, RING domain containing protein 1e+0 At3g61370 unknown protein S.X. H.G.
0.47 62.3 Os02g0180700 AK070746.1 - Cinnamoyl-CoA reductase (EC 1.2.1.44) 7e-7 At1g80820 CCR2 (CINNAMOYL COA REDUCTASE) S.X. H.G.
0.40 51.1 Os03g0801900 AK106415.1 - Protein of unknown function DUF569 family protein 7e-1 At1g55140 RNA binding / ribonuclease III S.X. H.G.
0.32 36.3 Os03g0307000 9631.m01916 - Hypothetical protein 1e-7 At1g56423 unknown protein S.X. H.G.
0.14 9.3 Os01g0667900 AK105335.1 - Glutaredoxin domain containing protein 2e+0 At4g38140 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.8 98.7 GSM159200 Inflorescence (P4, 10 - 15 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
13.3 98.4 GSM159198 Inflorescence (P4, 10 - 15 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
13.3 98.4 GSM159191 Young inflorescence (P1, upto 3 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
12.8 98.4 GSM159189 Young inflorescence (P1, upto 3 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
12.1 98.3 GSM159197 Inflorescence (P3, 5 - 10 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
11.5 98.2 GSM159195 Inflorescence (P3, 5 - 10 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
11.0 98.2 GSM159199 Inflorescence (P4, 10 - 15 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
8.3 97.7 GSM159264 Drought stress, biological rep 3 GSE6901 Expression data for stress treatment in rice seedlings
8.1 97.7 GSM159196 Inflorescence (P3, 5 - 10 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
7.4 97.5 GSM375770 gid2-1_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 1e-26 123 Os02g0150700 AK120070.1 - Zn-finger, RING domain containing protein 5e-3 At5g10650 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.04 7e-4 48 Os04g0603200 AK100301.1 - - 2e-1 At4g31450 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 3e-3 46 Os01g0934500 AK099792.1 - - 2e-3 At2g23580 MES4 (METHYL ESTERASE 4) C.G. S.X.
0.01 1e-2 44 Os04g0603100 AK073515.1 - Conserved hypothetical protein 5e+0 At2g10535 LCR29 (Low-molecular-weight cysteine-rich 29) C.G. S.X.
0.01 4e-2 42 Os01g0568100 9629.m03675 - - 6e-1 At4g20260 DREPP plasma membrane polypeptide family protein C.G. S.X.
0.01 2e-1 40 Os08g0238200 AK067264.1 - Endo-1,3;1,4-beta-D-glucanase precursor (EC3.2.1.-) 2e+0 At3g23570 dienelactone hydrolase family protein C.G. S.X.
0.01 2e-1 40 Os08g0283600 9636.m01850 - - 8e-1 At2g36050 OFP15 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 15) C.G. S.X.
0.01 2e-1 40 Os09g0499600 AK067280.1 - - 4e-1 At5g45870 Bet v I allergen family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-10 67 Arabidopsis thaliana At5g24870 832556 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;OMPFBVA - - - C.G. S.X.
0.02 3e-2 42 Glycine max Gma.4642.1.S1_at BI321936 C-terminal zinc-finger - 5e-8 At2g37150 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.46 8e-50 198 Hordeum vulgare Contig10711_at Contig10711 - - 2e-4 At5g10650 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.05 8e-9 63 Populus trichocarpa PtpAffx.218157.1.S1_at pmrna33691 hypothetical protein - 2e-11 At5g24870 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.15 1e-40 169 Triticum aestivum Ta.14012.2.S1_a_at BJ239223 - - 1e-6 At5g24870 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.07 4e-10 65 Vitis vinifera 1622184_at CF405631 hypothetical protein LOC100245643 - 4e-11 At5g10650 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.21 3e-33 143 Zea mays Zm.15637.1.A1_a_at CF630675 - - 2e+0 At5g24870 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0016567 The process by which one or more ubiquitin moieties are added to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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