CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0691400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os06g0691400 AK107208.1 - IAA-amino acid conjugate hydrolase-like protein(Fragment) 3e-4 At1g44350 ILL6 S.X. H.G.
0.57 77.0 Os04g0492800 9632.m03959 - Calmodulin (CaM) 3e-1 At3g07490 AGD11 (ARF-GAP domain 11) S.X. H.G.
0.38 46.9 Os06g0600400 AK106672.1 - Cytochrome P450 family protein 3e-1 At3g55790 unknown protein S.X. H.G.
0.14 9.3 Os05g0554400 AK102948.1 - Phosphatidyl serine synthase family protein 1e-12 At1g15110 phosphatidyl serine synthase family protein S.X. H.G.
0.12 7.2 Os03g0849800 AK069826.1 - Conserved hypothetical protein 6e-2 At2g02061 unknown protein S.X. H.G.
0.02 1.0 Os08g0446200 AK120424.1 - Receptor-like protein kinase precursor (EC2.7.1.37) 5e-1 At5g18760 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.4 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.8 99.2 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.0 99.1 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.0 99.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.7 99.0 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.7 98.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.2 98.8 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.3 98.8 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.3 98.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 4e-26 121 Os01g0706900 AK105646.1 - Auxin conjugate hydrolase (ILL5) 2e-1 At1g51760 IAR3 (IAA-ALANINE RESISTANT 3) C.G. S.X.
0.08 7e-25 117 Os10g0523000 AK069167.1 - Hypothetical protein 2e-3 At2g20613 unknown protein C.G. S.X.
0.07 3e-18 95 Os01g0560000 AY187620.1 - Auxin conjugate hydrolase (ILL5) 2e-4 At1g51780 ILL5 C.G. S.X.
0.06 6e-19 97 Os04g0521800 AK103369.1 - IAA-amino acid hydrolase homolog ILL3 3e-3 At3g02875 ILR1 (IAA-LEUCINE RESISTANT 1) C.G. S.X.
0.06 6e-7 57 Os07g0249800 AK110647.1 - IAA-amino acid hydrolase 1 (EC 3.5.1.-) 2e-10 At5g56650 ILL1 C.G. S.X.
0.01 9e-6 54 Os01g0267100 AK065023.1 - MT-A70 family protein 1e-17 At4g09980 EMB1691 (EMBRYO DEFECTIVE 1691) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e-4 48 Arabidopsis thaliana At1g44350 841026 ILL6 encodes a protein similar to IAA amino acid conjugate hydrolase. - - - C.G. S.X.
0.02 6e-3 44 Glycine max Gma.3543.1.S1_at BE822399 - - 3e-19 At1g44350 ILL6 C.G. S.X.
0.07 6e-16 85 Hordeum vulgare Contig7041_at Contig7041 - - 2e-7 At1g51760 IAR3 (IAA-ALANINE RESISTANT 3) C.G. S.X.
0.03 6e-6 54 Populus trichocarpa Ptp.4793.1.S1_at BU874027 iaa-amino acid hydrolase 9 - 5e-30 At1g44350 ILL6 C.G. S.X.
0.21 9e-94 345 Triticum aestivum TaAffx.38763.1.S1_at BJ211689 - - 3e+0 At2g14660 unknown protein C.G. S.X.
0.02 5e+0 32 Vitis vinifera 1620940_at CF201899.1 - - 2e+1 At5g66990 RWP-RK domain-containing protein C.G. S.X.
0.13 4e-69 262 Zea mays Zm.17395.1.A1_at CK347732 hypothetical protein LOC100191730 - 5e+0 At2g22920 serine carboxypeptidase S10 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006508 The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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