Gene omics information

Query gene ID Os06g0660400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5371.3Os06g0660400AK111110.1-Conserved hypothetical protein7e-5At3g26790FUS3 (FUSCA 3)S.X.H.G.
0.7793.1Os01g0971600AK070366.1-Sn-glycerol-3-phosphate dehydrogenase (Fragment)4e-12At5g40610glycerol-3-phosphate dehydrogenase (NAD+) / GPDHS.X.H.G.
0.7391.1Os01g0905400AK063530.1-Transcriptional factor B3 family protein2e-2At4g14580CIPK4 (CBL-interacting protein kinase 4)S.X.H.G.
0.6787.2Os03g07307009631.m05092--2e-1At2g22980serine-type carboxypeptidaseS.X.H.G.
0.6787.2Os12g0571500AK119942.1-Hypothetical protein3e-1At2g21060ATGRP2B (GLYCINE-RICH PROTEIN 2B)S.X.H.G.
0.6181.2Os08g0338500AK107751.1-Plant invertase/pectin methylesterase inhibitordomain containing protein2e-2At5g40860unknown proteinS.X.H.G.
0.6181.2Os12g0250800CF318760-Hypothetical protein4e+0At5g04390zinc finger (C2H2 type) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
85.8100.0GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
76.599.9GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
39.599.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
20.199.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
11.298.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in Musa
10.898.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.497.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.197.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.597.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.097.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-342Os03g01426009631.m00405-Myb, DNA-binding domain containing protein2e-5At3g01530AtMYB57 (myb domain protein 57)C.G.S.X.
0.038e-342Os12g0233100AK108229.1--9e-3At1g18750AGL65 (AGAMOUS-LIKE 65)C.G.S.X.
0.025e-446Os10g0466700AK120324.1-60S ribosomal protein L17 [Oryza sativa (japonicacultivar-group)]4e-62At1g0448060S ribosomal protein L23 (RPL23A)C.G.S.X.
0.028e-342Os06g0107600AK100838.1-Conserved hypothetical protein1e+1At5g56369-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-548Arabidopsis thalianaAt3g26790822293FUS3 (FUSCA 3)Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.---C.G.S.X.
0.059e-548Glycine maxGmaAffx.87834.1.S1_atBQ785824Developing seed beta-ketoacyl-ACP synthetase 2 mRNA, complete cds; nuclear gene for proplastid product-5e-5At3g26790FUS3 (FUSCA 3)C.G.S.X.
0.362e-62238Hordeum vulgareContig18991_atContig18991--4e+0At5g18748unknown proteinC.G.S.X.
0.049e-548Populus trichocarpaPtpAffx.144078.1.S1_atCK107271hypothetical protein-2e-21At4g37130hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.064e-342Triticum aestivumTaAffx.104796.1.S1_x_atCA744716--3e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeC.G.S.X.
0.047e-236Vitis vinifera1611792_atCF609858hypothetical protein LOC100262185-2e-2At3g47510unknown proteinC.G.S.X.
0.051e-136Zea maysZmAffx.871.1.A1_atAI770769--8e-1At1g69760unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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