Gene omics information

Query gene ID Os06g0660200
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os06g0660200AK101191.1-Auxin efflux carrier component 2 (AtPIN2) (Auxinefflux carrier AGR) (Polar-auxin-transport effluxcomponent AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitiveroot 1) (AtEIR1) (WAVY6)1e-15At1g70940PIN3 (PIN-FORMED 3)S.X.H.G.
0.6787.2Os08g0253800AK108045.1-Glycosyl transferase, family 2 domain containingprotein7e-14At4g31590ATCSLC5 (CELLULOSE-SYNTHASE LIKE C5)S.X.H.G.
0.5371.3Os04g0132500AK121779.1-Protein kinase domain containing protein5e-4At3g24240leucine-rich repeat transmembrane protein kinase, putativeS.X.H.G.
0.4762.3Os02g0454500AK064156.1-Membrane bound O-acyl transferase, MBOAT familyprotein5e-5At5g55360long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinS.X.H.G.
0.3134.5Os07g0573000AK120026.1-Conserved hypothetical protein1e-3At5g46030unknown proteinS.X.H.G.
0.2727.5Os03g0397400AK069928.1-Low affinity calcium transporter CAX2 (Fragment)2e-5At1g55720ATCAX6S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.899.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
25.399.5GSM275410Bala root tip_At the wax layer_rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
19.299.0GSM275413Azucena root tip_Buckled at the wax layer_rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
17.298.8GSM275415Azucena root tip_Before the wax layer_Rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
15.698.7GSM275416Azucena root tip_Before the wax layer_Rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
10.998.1GSM275406Azucena root tip_At the wax layer_rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
10.798.1GSM100441Rice Azucena 1ppm Arsenate Rep1GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
9.697.9GSM100442Rice Azucena 1ppm Arsenate Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
9.597.9GSM275407Azucena root tip_At the wax layer_rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
9.097.8GSM275409Bala root tip_At the wax layer_rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.321e-60236Os11g0137000AK103181.1-PIN1-like auxin transport protein2e-39At2g01420PIN4 (PIN-FORMED 4)C.G.S.X.
0.295e-66254Os06g0232300AK103208.1-Auxin transport protein REH11e-25At1g70940PIN3 (PIN-FORMED 3)C.G.S.X.
0.276e-78293Os01g0643300AK101504.1-Efflux carrier of polar auxin transport1e-19At1g70940PIN3 (PIN-FORMED 3)C.G.S.X.
0.271e-51206Os02g0743400AF056027.1-Auxin transport protein REH12e-33At1g73590PIN1 (PIN-FORMED 1)C.G.S.X.
0.077e-22107Os12g0600000AK109945.1-Hypothetical protein1e-4At2g01420PIN4 (PIN-FORMED 4)C.G.S.X.
0.071e-759Os01g0919800AK066552.1-Efflux carrier of polar auxin transport5e-5At5g16530PIN5 (PIN-FORMED 5)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.201e-1585Arabidopsis thalianaAt1g70940843432PIN3 (PIN-FORMED 3)A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in PIN3 trafficking to the plasma membrane.---C.G.S.X.
0.191e-28129Glycine maxGmaAffx.6711.1.S1_atAW350271--2e-30At5g57090EIR1 (ETHYLENE INSENSITIVE ROOT 1)C.G.S.X.
0.024e-240Hordeum vulgareContig4104_atContig4104--1e-19At1g73230nascent polypeptide-associated complex (NAC) domain-containing proteinC.G.S.X.
0.192e-24115Populus trichocarpaPtp.112.2.S1_a_atAY302060.1auxin efflux carrier component /// auxin efflux carrier component-2e-23At1g70940PIN3 (PIN-FORMED 3)C.G.S.X.
0.680674Triticum aestivumTa.22220.1.S1_atBT008949.1--5e-9At5g57090EIR1 (ETHYLENE INSENSITIVE ROOT 1)C.G.S.X.
0.109e-857Vitis vinifera1621946_atCB975415hypothetical protein LOC100249181-4e-19At1g73590PIN1 (PIN-FORMED 1)C.G.S.X.
0.125e-38159Zea maysZm.7858.1.A1_atAY108500.1--3e-3At1g70940PIN3 (PIN-FORMED 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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