CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0602800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.96 99.7 Os06g0602800 AK070134.1 - Conserved hypothetical protein 2e-7 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein S.X. H.G.
0.33 38.8 Os02g0810400 AK111554.1 - Dual specificity kinase 1 4e-68 At3g23340 ckl10 (Casein Kinase I-like 10) S.X. H.G.
0.32 36.3 Os04g0485800 AK100299.1 - Cyclin-like F-box domain containing protein 4e-1 At5g14690 unknown protein S.X. H.G.
0.32 36.3 Os03g0322800 AK101817.1 - Engulfment and cell motility, ELM domaincontaining protein 1e-2 At1g03620 phagocytosis and cell motility protein ELMO1-related S.X. H.G.
0.28 31.1 Os06g0608500 AK070667.1 - Snf7 family protein 1e-30 At2g19830 SNF7.2 S.X. H.G.
0.28 31.1 Os10g0542200 AK065246.1 - Ubiquitin domain containing protein 5e-6 At2g17200 ubiquitin family protein S.X. H.G.
0.25 24.1 Os03g0765100 AK062731.1 - Conserved hypothetical protein 2e+0 At4g22105 SCRL26 (SCR-Like 26) S.X. H.G.
0.25 24.1 Os02g0628800 AK058725.1 - Ubiquitin-like protein 5 2e-30 At3g45180 ubiquitin family protein S.X. H.G.
0.25 24.1 Os04g0398600 AK073335.1 - - 3e-32 At5g61840 GUT1 S.X. H.G.
0.24 22.4 Os06g0714500 AK100047.1 - - 7e-17 At4g27680 MSP1 protein, putative / intramitochondrial sorting protein, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.2 97.1 GSM278855 KT95-418-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
6.0 97.0 GSM159262 Drought stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
5.9 97.0 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
5.4 96.8 GSM159264 Drought stress, biological rep 3 GSE6901 Expression data for stress treatment in rice seedlings
5.2 96.7 GSM159263 Drought stress, biological rep 2 GSE6901 Expression data for stress treatment in rice seedlings
5.1 96.6 GSM262020 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
4.9 96.5 GSM262021 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
4.3 96.1 GSM149412 Rice Bala 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
4.2 96.0 GSM173089 Rice MH63 Control3 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
4.1 96.0 GSM159185 Y Leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 1e-13 79 Os12g0639700 AK069880.1 - - 5e-8 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.05 2e-5 52 Os03g0692000 9631.m04726 - Glycosyl transferase, family 14 protein 7e-4 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.04 1e-3 46 Os08g0143500 AK061094.1 - Glycosyl transferase, family 14 protein 3e-2 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.02 3e-1 38 Os10g0437000 CB657474 - Glycosyl transferase, family 14 protein 1e-5 At3g03690 UNE7 (unfertilized embryo sac 7) C.G. S.X.
0.01 3e-1 38 Os01g0859400 AK072832.1 - Dual specificity protein phosphatase familyprotein 1e-1 At5g65210 TGA1 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 2e-7 57 Arabidopsis thaliana At5g15050 831357 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPBVO - - - C.G. S.X.
0.28 4e-9 63 Glycine max GmaAffx.81520.1.S1_at BM521529 - - 5e-5 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.32 8e-30 131 Hordeum vulgare Contig18387_at Contig18387 - - 1e+0 At2g46650 CB5-C (CYTOCHROME B5 ISOFORM C) C.G. S.X.
0.23 1e-21 105 Populus trichocarpa PtpAffx.205088.1.S1_at pmrna10083 hypothetical protein - 2e-3 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.06 8e-4 46 Triticum aestivum Ta.13955.1.A1_at BQ752694 - - 4e-14 At4g03340 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.19 1e-18 93 Vitis vinifera 1622113_at CF209612 hypothetical protein LOC100245719 - 4e-61 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.10 1e-9 63 Zea mays ZmAffx.1120.1.A1_at AW267424 hypothetical protein LOC100191516 - 8e-1 At2g23610 MES3 (METHYL ESTERASE 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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