CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0531900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os06g0531900 AK067909.1 - Lipolytic enzyme, G-D-S-L family protein 8e-1 At3g16100 ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C) S.X. H.G.
0.73 91.1 Os05g0140100 AK111821.1 - Myb, DNA-binding domain containing protein 1e-10 At1g57560 AtMYB50 (myb domain protein 50) S.X. H.G.
0.43 55.4 Os11g0448700 AK068659.1 - Hypothetical protein 9e-2 At3g42310 unknown protein S.X. H.G.
0.35 41.7 Os03g0323900 AK108122.1 - Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein 1e-1 At1g04445 zinc finger (C2H2 type) family protein S.X. H.G.
0.32 36.3 Os04g0505200 AK066703.1 - Leucine-rich repeat, plant specific containingprotein 1e-7 At1g01910 anion-transporting ATPase, putative S.X. H.G.
0.26 25.6 Os03g0817800 AK065071.1 - Protein of unknown function DUF231 domaincontaining protein 2e-3 At1g78710 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.9 98.0 GSM159172 Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
9.7 98.0 GSM99878 TCHW P20_ir29 control, biological rep2 GSE4438 Expression data from rice under salinity stress
9.5 97.9 GSM159202 Inflorescence (P5, 15 - 22 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
8.2 97.7 GSM159201 Inflorescence (P5, 15 - 22 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
8.1 97.7 GSM99864 TCHW P7_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
8.1 97.7 GSM99877 TCHW P19_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
7.9 97.6 GSM159203 Inflorescence (P5, 15 - 22 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
7.8 97.6 GSM99867 TCHW P10_ir29 salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
7.6 97.5 GSM159173 Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
7.3 97.5 GSM99881 TCHW P23_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 1e-44 182 Os05g0209600 AY580163.1 - Lipolytic enzyme, G-D-S-L family protein 2e-1 At5g03980 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.13 2e-30 135 Os06g0156600 AK121780.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At2g47570 60S ribosomal protein L18 (RPL18A) C.G. S.X.
0.12 3e-20 101 Os01g0214600 CA763435 - Lipolytic enzyme, G-D-S-L family protein 4e-2 At1g04778 unknown protein C.G. S.X.
0.08 1e-25 119 Os06g0156700 AK120456.1 - Lipolytic enzyme, G-D-S-L family protein 6e-1 At5g66400 RAB18 (RESPONSIVE TO ABA 18) C.G. S.X.
0.05 2e-18 95 Os07g0642200 AK058442.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At1g28590 lipase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-1 36 Arabidopsis thaliana At3g16100 820855 ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C) F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane, nucleus;MOFPBVA - - - C.G. S.X.
0.02 3e-1 38 Glycine max GmaAffx.57032.1.A1_at AI856432 plasma membrane Ca2+-ATPase - 2e-1 At2g33810 SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3) C.G. S.X.
0.61 0 1043 Hordeum vulgare Contig8549_at Contig8549 - - 2e-1 At5g10510 AIL6 (AINTEGUMENTA-LIKE 6) C.G. S.X.
0.02 7e-2 40 Populus trichocarpa PtpAffx.218298.1.S1_at pmrna33861 hypothetical protein - 7e+0 At1g55770 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.55 0 979 Triticum aestivum Ta.29445.1.S1_at CK212497 - - 3e+0 At3g48660 unknown protein C.G. S.X.
0.02 4e+0 32 Vitis vinifera 1611824_at CF405372 - - 3e+0 Atmg01280 - C.G. S.X.
0.36 1e-124 446 Zea mays Zm.6638.1.A1_at AI619165 esterase - 4e-1 At3g16100 ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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