CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0531600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.58 77.0 Os06g0531600 AK059898.1 - Lipolytic enzyme, G-D-S-L family protein 2e-1 At5g59000 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.42 53.9 Os06g0655100 CF308917 - D-3-phosphoglycerate dehydrogenase family protein 2e-2 At2g25830 YebC-related S.X. H.G.
0.36 44.0 Os05g0544900 AK109267.1 - Hypothetical protein 5e-1 At4g23770 unknown protein S.X. H.G.
0.33 38.8 Os06g0214900 AK064752.1 - Pyridine nucleotide-disulphide oxidoreductase,class I family protein 3e-13 At5g08740 NDC1 (NAD(P)H dehydrogenase C1) S.X. H.G.
0.33 38.8 Os07g0172600 9635.m00711 - TPR-like domain containing protein 1e+0 At3g56550 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.30 32.7 Os07g0490400 AK067941.1 - Peptidylprolyl isomerase, FKBP-type domaincontaining protein 2e-3 At3g60370 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein S.X. H.G.
0.30 32.7 Os02g0199300 AK064726.1 - Peptidylprolyl isomerase, FKBP-type domaincontaining protein 2e-6 At4g26555 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein S.X. H.G.
0.27 27.5 Os07g0567400 AK068245.1 - - 1e-4 At5g45040 cytochrome c6 (ATC6) S.X. H.G.
0.25 24.1 Os06g0246101 CB644318 - - 2e+0 At1g03650 GCN5-related N-acetyltransferase (GNAT) family protein S.X. H.G.
0.23 21.2 Os02g0566000 AK059295.1 - Conserved hypothetical protein 4e+0 At5g64900 PROPEP1 S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.5 98.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.1 98.4 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.9 98.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.8 98.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.7 98.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.5 98.2 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.8 98.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.8 98.1 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.5 98.1 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.5 98.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 0 958 Os06g0156700 AK120456.1 - Lipolytic enzyme, G-D-S-L family protein 6e-1 At5g66400 RAB18 (RESPONSIVE TO ABA 18) C.G. S.X.
0.17 5e-25 117 Os02g0250400 AK070671.1 - Lipolytic enzyme, G-D-S-L family protein 2e+0 At4g27880 seven in absentia (SINA) family protein C.G. S.X.
0.15 7e-52 206 Os01g0214800 AK065001.1 - Lipolytic enzyme, G-D-S-L family protein 5e-2 At1g28590 lipase, putative C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-1 38 Arabidopsis thaliana At5g59000 836017 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOFPVBA - - - C.G. S.X.
0.04 4e-3 44 Glycine max GmaAffx.35686.1.S1_at CA800068 - - 3e-3 At1g28580 GDSL-motif lipase, putative C.G. S.X.
0.41 4e-47 188 Hordeum vulgare Contig4897_at Contig4897 - - 8e-1 At1g04445 zinc finger (C2H2 type) family protein C.G. S.X.
0.03 1e-3 46 Populus trichocarpa PtpAffx.61229.1.S1_at DN498245 - - 2e+0 At1g36640 unknown protein C.G. S.X.
0.48 7e-137 488 Triticum aestivum Ta.850.1.S1_at BJ240234 - - 2e+0 At5g36900 unknown protein C.G. S.X.
0.02 1e-2 40 Vitis vinifera 1615188_at CB974599 - - 9e-1 At3g02310 SEP2 (SEPALLATA 2) C.G. S.X.
0.27 1e-59 230 Zea mays Zm.13829.1.A1_at AY104407.1 hypothetical protein LOC100193761 - 2e-1 At5g03980 GDSL-motif lipase/hydrolase family protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage