CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0528000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os06g0528000 NM_196265.1 - - 1e+0 At5g52570 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2) S.X. H.G.
0.83 95.8 Os07g0456000 9635.m02632 - - 1e+0 At4g27150 2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2 S.X. H.G.
0.61 81.2 Os09g0259366 9637.m00619 - - 6e+0 At5g60400 unknown protein S.X. H.G.
0.61 81.2 Os01g0593100 NM_192598.1 - Hypothetical protein 2e+0 At1g43330 myb family protein-related S.X. H.G.
0.50 68.0 Os03g0566900 NM_184753.1 - - 1e+0 At3g11600 unknown protein S.X. H.G.
0.50 68.0 Os05g0439750 9633.m03398 - - 1e-2 At2g41380 embryo-abundant protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
113.7 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
57.6 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.1 99.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.6 99.1 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.2 98.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.4 98.9 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.3 98.9 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.3 98.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.2 98.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.6 98.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 3e-18 93 Os10g0170900 9638.m00773 - - 2e-1 At2g47660 unknown protein C.G. S.X.
0.04 2e-22 107 Os04g0446600 AK106628.1 - Conserved hypothetical protein 9e-1 At2g14700 unknown protein C.G. S.X.
0.04 1e-6 54 Os10g0317300 CB620207 - Conserved hypothetical protein 3e+0 At5g66190 FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1) C.G. S.X.
0.03 3e-15 83 Os05g0501400 AK110116.1 - Receptor-like protein kinase 5 6e-6 At4g03230 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding C.G. S.X.
0.03 8e-8 57 Os03g0192500 AK068957.1 - Protein phosphatase 2C-like domain containingprotein 2e-2 At4g33500 protein phosphatase 2C-related / PP2C-related C.G. S.X.
0.02 8e-8 57 Os08g0560900 AK072473.1 - Photosystem I reaction center subunit II,chloroplast precursor (Photosystem I 20 kDa subunit)(PSI-D) 2e-6 At4g02770 PSAD-1 (photosystem I subunit D-1) C.G. S.X.
0.01 1e+0 34 Os03g0576100 AK100723.1 - FAR1 domain containing protein 9e-2 At4g36590 MADS-box protein (AGL40) C.G. S.X.
0.01 1e+0 34 Os08g0389800 9636.m02993 - FAR1 domain containing protein 7e-2 At3g58850 PAR2 (PHY RAPIDLY REGULATED 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e+0 32 Arabidopsis thaliana At5g25210 832592 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.05 3e+0 32 Glycine max HgAffx.18922.1.S1_at CA940258 - - 6e-1 At3g16175 thioesterase family protein C.G. S.X.
0.06 7e-5 46 Hordeum vulgare Contig13376_at Contig13376 - - 5e-5 At4g33500 protein phosphatase 2C-related / PP2C-related C.G. S.X.
0.06 3e+0 32 Populus trichocarpa PtpAffx.202012.1.S1_at pmrna4012 hypothetical protein - 2e+0 At5g11416 unknown protein C.G. S.X.
0.06 6e-1 34 Triticum aestivum Ta.2288.3.S1_at CA646466 - - 1e+0 At3g61230 LIM domain-containing protein C.G. S.X.
0.04 2e-1 34 Vitis vinifera 1607128_at CF513398 hypothetical protein LOC100249973 - 8e-2 At1g79780 - C.G. S.X.
0.04 7e-11 65 Zea mays Zm.5527.1.A1_at BG840987 - - 3e-1 At3g49950 scarecrow transcription factor family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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