CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0500300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 79.7 Os06g0500300 CB669548 - Hypothetical protein 3e+0 At5g66110 metal ion binding S.X. H.G.
0.21 17.9 Os11g0214100 9639.m01021 - Histidine-rich glycoprotein precursor 3e+0 At5g23100 unknown protein S.X. H.G.
0.17 12.6 Os02g0551700 AK106428.1 - Protein of unknown function DUF668 family protein 8e-1 At1g34320 unknown protein S.X. H.G.
0.14 9.3 Os01g0852100 CB664209 - Protein kinase domain containing protein 2e-1 At5g03320 protein kinase, putative S.X. H.G.
0.14 9.3 Os06g0273700 AK106489.1 - Protein of unknown function DUF231 domaincontaining protein 4e+0 At5g15900 unknown protein S.X. H.G.
0.10 5.7 Os12g0595800 AK121185.1 - Protein kinase domain containing protein 8e-5 At2g23450 protein kinase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
59.4 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
19.3 99.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.8 98.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.2 98.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.6 97.9 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.9 97.8 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.4 97.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.2 97.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.2 97.4 GSM262009 IAC165, 11 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 3e-29 131 Os02g0711900 BM038288 - Conserved hypothetical protein 6e+0 At3g17130 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.06 9e-8 59 Os09g0364800 AK068537.1 - Heavy metal transport/detoxification proteindomain containing protein 2e-2 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.02 8e-2 40 Os02g0579300 9630.m03526 - Myb, DNA-binding domain containing protein 3e-24 At3g01140 MYB106 (myb domain protein 106) C.G. S.X.
0.02 8e-2 40 Os11g0603300 9639.m03552 - - 2e-1 At4g19270 unknown protein C.G. S.X.
0.02 3e-1 38 Os04g0644200 9632.m05360 - Integrase, catalytic region domain containingprotein 3e+0 At4g32714 SCRL25 (SCR-Like 25) C.G. S.X.
0.01 2e-2 42 Os05g0560600 AK122091.1 - Homeodomain-like containing protein 1e+0 At3g58630 transcription factor C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 34 Arabidopsis thaliana At5g66110 836743 metal ion binding F:metal ion binding;P:metal ion transport;C:plasma membrane;PFM - - - C.G. S.X.
0.02 9e-1 36 Glycine max PsAffx.psMC011xE06f_at PsAffx.psMC011xE06f - - 9e+0 At3g46380 unknown protein C.G. S.X.
0.02 8e-2 38 Hordeum vulgare Contig1129_at Contig1129 - - 8e-8 At3g09480 histone H2B, putative C.G. S.X.
0.03 6e-2 40 Populus trichocarpa PtpAffx.3096.3.S1_at DN485946 - - 7e+0 At5g09770 ribosomal protein L17 family protein C.G. S.X.
0.03 2e-1 38 Triticum aestivum Ta.24128.2.S1_a_at BE403805 - - 1e-12 At2g21580 40S ribosomal protein S25 (RPS25B) C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1621047_at CB968782 - - 1e+0 At1g71050 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.02 3e-1 36 Zea mays Zm.3921.1.S1_at AY107577.1 hypothetical protein LOC100276097 - 2e+1 At4g18930 cyclic phosphodiesterase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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