CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0494400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os06g0494400 AK067594.1 - Multi antimicrobial extrusion protein MatE familyprotein 1e-3 At5g52450 MATE efflux protein-related S.X. H.G.
0.50 68.0 Os01g0551000 AK071219.1 - Conserved hypothetical protein 3e+0 At1g07950 surfeit locus protein 5 family protein / SURF5 family protein S.X. H.G.
0.48 63.7 Os01g0965900 AK108889.1 - Conserved hypothetical protein 1e-7 At5g04830 unknown protein S.X. H.G.
0.43 55.4 Os04g0613300 AK065653.1 - Conserved hypothetical protein 2e-10 At1g16320 unknown protein S.X. H.G.
0.36 44.0 Os10g0206500 CF294964 - Conserved hypothetical protein 4e-1 At5g47700 60S acidic ribosomal protein P1 (RPP1C) S.X. H.G.
0.31 34.5 Os01g0227400 AK108512.1 - Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1)(ARP-2) 1e+0 At5g47080 CKB1 S.X. H.G.
0.31 34.5 Os02g0498300 AK070515.1 - Protein of unknown function DUF803 family protein 8e-7 At3g23870 permease-related S.X. H.G.
0.28 31.1 Os01g0362100 AK065319.1 - Esterase/lipase/thioesterase domain containingprotein 3e-4 At1g54570 esterase/lipase/thioesterase family protein S.X. H.G.
0.23 21.2 Os08g0562800 AK103815.1 - Multi antimicrobial extrusion protein MatE familyprotein 4e-6 At4g25640 MATE efflux family protein S.X. H.G.
0.23 21.2 Os05g0574700 AK108682.1 - Conserved hypothetical protein 3e+0 At3g44210 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.9 98.7 GSM357134 14-day-old seedling, rep 3 GSE14275 Expression data for heat shock in rice seedlings
15.5 98.7 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
14.2 98.5 GSM357122 14-day-old seedling, rep 1 GSE14275 Expression data for heat shock in rice seedlings
13.8 98.5 GSM421706 XOO, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.6 98.2 GSM421704 XOO, 96 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.1 98.0 GSM278855 KT95-418-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
9.0 97.8 GSM421705 XOO, 96 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.9 97.8 GSM421703 XOO, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.7 97.8 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.6 97.8 GSM421682 XOC, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.60 0 2173 Os02g0294800 9630.m01834 - - 4e-1 At1g42710 - C.G. S.X.
0.60 0 692 Os06g0495100 9634.m02875 - Conserved hypothetical protein 3e+0 At5g52450 MATE efflux protein-related C.G. S.X.
0.52 0 1033 Os06g0495500 AK109873.1 - Multi antimicrobial extrusion protein MatE familyprotein 6e-5 At2g34360 antiporter/ drug transporter/ transporter C.G. S.X.
0.32 1e-38 163 Os04g0373400 9632.m02891 - Multi antimicrobial extrusion protein MatE familyprotein 2e-4 At5g52450 MATE efflux protein-related C.G. S.X.
0.29 2e-34 149 Os10g0344000 AK105578.1 - Multi antimicrobial extrusion protein MatE familyprotein 6e-2 At5g52450 MATE efflux protein-related C.G. S.X.
0.22 2e-61 238 Os10g0190900 AK070457.1 - - 5e-5 At2g34360 antiporter/ drug transporter/ transporter C.G. S.X.
0.22 3e-45 184 Os10g0344900 AK073245.1 - Multi antimicrobial extrusion protein MatE familyprotein 2e-1 At5g52450 MATE efflux protein-related C.G. S.X.
0.15 7e-71 270 Os06g0494700 9634.m02870 - Hypothetical protein 2e-4 At5g52450 MATE efflux protein-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 1e-3 46 Arabidopsis thaliana At5g52450 835321 MATE efflux protein-related F:antiporter activity, drug transporter activity, transporter activity;P:response to nematode;C:plasma membrane, membrane;BOPFAM - - - C.G. S.X.
0.01 1e+0 36 Glycine max PsAffx.CL1753Contig1_at PsAffx.CL1753Contig1 - - 2e+1 At3g48020 - C.G. S.X.
0.19 3e-36 153 Hordeum vulgare Contig23029_at Contig23029 - - 8e-2 At1g73700 MATE efflux family protein C.G. S.X.
0.03 8e-2 40 Populus trichocarpa PtpAffx.217584.1.S1_at pmrna32913 hypothetical protein - 8e-10 At5g52450 MATE efflux protein-related C.G. S.X.
0.11 2e-20 101 Triticum aestivum Ta.7327.1.S1_at CK196817 - - 4e+0 At2g34360 antiporter/ drug transporter/ transporter C.G. S.X.
0.02 3e-1 36 Vitis vinifera 1619081_at CB343442 hypothetical protein LOC100257810 - 3e-2 At5g52450 MATE efflux protein-related C.G. S.X.
0.02 1e-1 38 Zea mays ZmAffx.1014.1.A1_at AI881465 - - 2e-1 At1g59750 ARF1 (AUXIN RESPONSE FACTOR 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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