CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0486000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os06g0486000 AK100169.1 - Protein kinase domain containing protein 5e-3 At1g23540 protein kinase family protein S.X. H.G.
0.67 87.2 Os07g0257100 9635.m01529 - - 3e+0 At2g43870 polygalacturonase, putative / pectinase, putative S.X. H.G.
0.29 31.1 Os05g0455001 9633.m03527 - - 2e+0 At5g60350 unknown protein S.X. H.G.
0.26 25.6 Os03g0694600 AK110834.1 - Hypothetical protein 3e+0 At5g38750 asparaginyl-tRNA synthetase family S.X. H.G.
0.15 10.3 Os05g0312200 9633.m02206 - - 2e-1 At3g28200 peroxidase, putative S.X. H.G.
0.04 2.0 Os10g0167800 NM_195037.1 - - 6e-1 At2g14835 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
38.4 99.8 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
37.7 99.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.4 99.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.5 99.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.4 99.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.8 99.6 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.7 99.6 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.9 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.3 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 9e-65 250 Os10g0104800 AK100339.1 - Serine/threonine protein kinase family protein 1e-15 At1g49270 protein kinase family protein C.G. S.X.
0.15 7e-44 180 Os03g0568800 AK070389.1 - Protein kinase domain containing protein 1e-6 At1g10620 protein kinase family protein C.G. S.X.
0.06 6e-29 131 Os05g0516400 AK068854.1 - Pistil-specific extensin-like protein familyprotein 3e+0 At3g03405 - C.G. S.X.
0.05 1e-26 123 Os01g0750600 NM_191238.1 - Protein kinase domain containing protein 4e-3 At3g18810 protein kinase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-3 44 Arabidopsis thaliana At1g23540 838963 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOBFPVA - - - C.G. S.X.
0.03 3e-2 42 Glycine max Gma.16033.1.S1_at BQ134078 - - 4e+0 At4g21720 unknown protein C.G. S.X.
0.05 4e-5 50 Hordeum vulgare Contig11070_at Contig11070 - - 2e-1 At5g62500 ATEB1B (END BINDING PROTEIN 1B) C.G. S.X.
0.03 5e-4 48 Populus trichocarpa PtpAffx.13670.1.S1_at CV265271 - - 1e-27 At3g24550 ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1) C.G. S.X.
0.16 2e-21 105 Triticum aestivum TaAffx.64716.1.S1_at BJ279767 - - 3e-13 At1g10620 protein kinase family protein C.G. S.X.
0.02 2e-3 44 Vitis vinifera 1622140_at CB837772 - - 1e+0 At2g16750 protein kinase family protein C.G. S.X.
0.02 9e-3 42 Zea mays Zm.3558.1.A1_at CA402352 - - 3e+0 At1g68620 hydrolase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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