CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0351200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os06g0351200 9634.m02404 - - 2e+0 At1g10747 - S.X. H.G.
0.61 81.2 Os06g0625200 9634.m04048 - Protein kinase domain containing protein 6e-2 At2g15440 unknown protein S.X. H.G.
0.60 79.7 Os11g0142950 9640.m00363 - - 3e-1 At2g25130 armadillo/beta-catenin repeat family protein S.X. H.G.
0.57 77.0 Os10g0148200 9638.m00489 - - 3e+0 At2g32210 unknown protein S.X. H.G.
0.55 73.7 Os11g0453600 9639.m02384 - - 1e-1 At2g11005 glycine-rich protein S.X. H.G.
0.33 38.8 Os06g0106200 9634.m00069 - - 2e+0 At5g22280 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
134.2 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
69.0 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.0 99.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.6 99.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.4 99.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.5 98.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.1 98.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.1 98.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.0 98.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.7 98.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-2 38 Os04g0532200 AK110853.1 - Conserved hypothetical protein 3e+0 At4g35610 zinc finger (C2H2 type) family protein C.G. S.X.
0.03 2e-1 36 Os01g0660100 AK108487.1 - Conserved hypothetical protein 6e-1 At5g42635 glycine-rich protein C.G. S.X.
0.03 2e-1 36 Os03g0767700 AK073586.1 - DYW9 protein (Fragment) 2e+0 At4g16835 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.02 6e-2 38 Os02g0221500 AK100904.1 - Paraneoplastic encephalomyelitis antigen familyprotein 1e-3 At5g40490 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.02 2e-1 36 Os01g0660000 AK064265.1 - - 6e-1 At5g42635 glycine-rich protein C.G. S.X.
0.01 2e-1 36 Os06g0308300 AK102553.1 - 65kD microtubule associated protein 3e-29 At5g55230 ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1) C.G. S.X.
0.01 9e-1 34 Os10g0485600 9638.m03031 - Type III restriction enzyme, res subunit familyprotein 1e-1 At5g54160 ATOMT1 (O-METHYLTRANSFERASE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e+0 32 Arabidopsis thaliana At1g10747 5007680 - Encodes a Maternally expressed gene (MEG) family protein - - - C.G. S.X.
0.05 6e-1 34 Glycine max Gma.8198.1.S1_at BU549214 - - 8e-5 At4g09550 unknown protein C.G. S.X.
0.06 6e-2 36 Hordeum vulgare EBro02_SQ002_C17_s_at EBro02_SQ002_C17 - - 5e-2 At3g28857 transcription regulator C.G. S.X.
0.04 6e-1 34 Populus trichocarpa PtpAffx.114108.1.A1_s_at CV270939 - - 2e-3 At3g06530 binding C.G. S.X.
0.04 2e+0 32 Triticum aestivum TaAffx.24915.1.S1_at CA709989 - - 2e-1 At5g66815 unknown protein C.G. S.X.
0.05 1e-1 34 Vitis vinifera 1607444_at BQ798524 hypothetical protein LOC100247182 - 1e+0 At4g20095 unknown protein C.G. S.X.
0.06 3e+0 30 Zea mays ZmAffx.1288.1.S1_s_at 40794996-21 - - 3e+0 At1g28200 FIP1 (FH INTERACTING PROTEIN 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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