CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0300300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os06g0300300 AK068813.1 - Conserved hypothetical protein 2e-3 At4g26550 - S.X. H.G.
0.50 68.0 Os04g0600400 AK072894.1 - Conserved hypothetical protein 6e-1 At2g35470 unknown protein S.X. H.G.
0.50 68.0 Os06g0608600 AK061418.1 - Conserved hypothetical protein 9e-3 At5g56020 - S.X. H.G.
0.44 58.1 Os06g0238900 AK106064.1 - Protein of unknown function DUF716 family protein 2e-1 At3g45980 HTB9 S.X. H.G.
0.25 24.1 Os05g0279600 AK070566.1 - Conserved hypothetical protein 3e-9 At4g30900 - S.X. H.G.
0.18 13.7 Os08g0499200 AK120828.1 - Cl- channel, voltage gated family protein 1e-65 At1g55620 CLC-F (CHLORIDE CHANNEL F) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
47.8 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.1 97.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.6 97.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.2 97.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.6 96.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.3 96.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.2 96.7 GSM278855 KT95-418-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
5.2 96.7 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.0 96.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.8 96.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e-19 97 Os06g0608600 AK061418.1 - Conserved hypothetical protein 9e-3 At5g56020 - C.G. S.X.
0.03 3e-4 48 Os02g0564000 AK073086.1 - Glutathione S-transferase 5e-1 At5g59850 40S ribosomal protein S15A (RPS15aF) C.G. S.X.
0.03 1e-3 46 Os02g0551600 AK063102.1 - Conserved hypothetical protein 2e+0 At4g24026 unknown protein C.G. S.X.
0.03 4e-3 44 Os06g0537700 AK109530.1 - Hypothetical protein 2e-3 At3g58100 PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5) C.G. S.X.
0.02 3e-4 48 Os05g0455200 AK063788.1 - Homeodomain protein JUBEL2 8e-2 At2g35940 BLH1 (BEL1-LIKE HOMEODOMAIN 1) C.G. S.X.
0.02 4e-3 44 Os12g0577000 9640.m03777 - Targeting for Xklp2 family protein 5e-2 At5g38980 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-3 44 Arabidopsis thaliana At4g26550 828761 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFP - - - C.G. S.X.
0.04 1e-2 42 Glycine max Gma.6945.1.A1_at BI469250 - - 7e-11 At4g26550 - C.G. S.X.
0.53 5e-169 593 Hordeum vulgare Contig13786_at Contig13786 - - 6e-4 At5g56020 - C.G. S.X.
0.03 2e-1 38 Populus trichocarpa PtpAffx.51517.1.A1_at CV254879 hypothetical protein - 4e-1 At3g59640 glycine-rich protein C.G. S.X.
0.45 1e-146 519 Triticum aestivum Ta.4988.1.S1_at BJ286674 - - 5e-5 At5g56020 - C.G. S.X.
0.07 2e-6 52 Vitis vinifera 1614081_at CF209958 hypothetical protein LOC100256660 - 1e-16 At4g26550 - C.G. S.X.
0.05 2e-1 36 Zea mays Zm.18240.1.S1_at CF637204 protein SFT2 - 2e-3 At5g56020 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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