CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0296700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.44 58.1 Os06g0296700 AK065533.1 - Hypothetical protein 1e+0 At4g13150 unknown protein S.X. H.G.
0.50 68.0 Os10g0439200 9638.m02604 - Alpha-expansin OsEXPA25 1e-4 At2g37640 EXP3 S.X. H.G.
0.50 68.0 Os01g0937600 AK064091.1 - Peptidase aspartic family protein 1e+1 At5g44500 small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative S.X. H.G.
0.27 27.5 Os12g0431300 AK110931.1 - Quinoprotein amine dehydrogenase, beta chain-likedomain containing protein 3e-1 At1g49110 unknown protein S.X. H.G.
0.26 25.6 Os01g0533900 AK101194.1 - Multidrug resistance protein 1 homolog 4e-4 At4g18050 PGP9 (P-GLYCOPROTEIN 9) S.X. H.G.
0.19 15.1 Os11g0265800 9639.m01486 - 2OG-Fe(II) oxygenase domain containing protein 3e+0 At1g50320 ATHX S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
36.4 99.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.0 99.6 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.1 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.7 99.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.9 99.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.5 99.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.0 98.8 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.4 98.8 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.0 98.7 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.50 9e-53 210 Os06g0295600 9634.m01851 - - 9e-2 At4g27310 zinc finger (B-box type) family protein C.G. S.X.
0.41 5e-48 194 Os06g0296100 9634.m01855 - - 1e+0 At5g67580 TRB2 C.G. S.X.
0.12 2e-13 79 Os06g0295000 9634.m01843 - Hypothetical protein 1e+0 At5g37560 zinc ion binding C.G. S.X.
0.11 5e-17 91 Os06g0294000 AK067472.1 - Hypothetical protein 4e-1 At1g68100 IAR1 (IAA-ALANINE RESISTANT 1) C.G. S.X.
0.10 3e-52 208 Os06g0295500 AK119433.1 - Hypothetical protein 3e-2 At5g66815 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e+0 36 Arabidopsis thaliana At4g13150 826929 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.01 5e-1 38 Glycine max HgAffx.20569.1.S1_at BI749184 - - 3e+0 At3g54880 unknown protein C.G. S.X.
0.01 2e-1 38 Hordeum vulgare Contig24322_at Contig24322 - - 5e+0 At2g04425 LCR82 (Low-molecular-weight cysteine-rich 82) C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.217959.1.S1_at pmrna33443 hypothetical protein - 2e+0 At1g30515 unknown protein C.G. S.X.
0.05 1e-4 50 Triticum aestivum TaAffx.113125.1.S1_at CA617817 - - 2e+1 At5g49510 PDF3 (PREFOLDIN 3) C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1608560_at CF405443 hypothetical protein LOC100250989 - 3e+0 At3g09890 ankyrin repeat family protein C.G. S.X.
0.01 6e-1 36 Zea mays Zm.18992.1.A1_at CO521210 - - 4e-1 At5g20370 serine-rich protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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