CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0295600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.69 87.9 Os06g0295600 9634.m01851 - - 9e-2 At4g27310 zinc finger (B-box type) family protein S.X. H.G.
0.67 87.2 Os10g0373800 NM_196137.1 - - 2e+0 At5g14100 ATNAP14 S.X. H.G.
0.64 83.4 Os03g0249600 9631.m01397 - - 2e-1 At4g24150 AtGRF8 (GROWTH-REGULATING FACTOR 8) S.X. H.G.
0.55 73.7 Os02g0793400 AK109835.1 - - 7e-1 At4g16240 unknown protein S.X. H.G.
0.54 71.9 Os01g0523100 NM_193678.1 - - 1e-1 At1g29720 protein kinase family protein S.X. H.G.
0.50 68.0 Os01g0856066 9629.m06304 - - 8e+0 At4g10465 metal ion binding S.X. H.G.
0.48 63.7 Os08g0314433 9633.m01624 - - 1e+1 At5g12360 unknown protein S.X. H.G.
0.46 60.9 Os03g0325000 9631.m02079 - Pyruvate kinase family protein 3e-31 At5g56350 pyruvate kinase, putative S.X. H.G.
0.42 53.9 Os02g0125500 9630.m00232 - - 7e-1 At2g15830 unknown protein S.X. H.G.
0.40 51.1 Os12g0479300 AK109886.1 - HcrVf1 protein 3e-1 At2g32480 membrane-associated zinc metalloprotease, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
36.5 99.8 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
36.2 99.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.6 99.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.0 99.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.9 99.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.0 99.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.3 99.5 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.0 99.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.3 99.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.0 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.64 3e-139 498 Os06g0296100 9634.m01855 - - 1e+0 At5g67580 TRB2 C.G. S.X.
0.49 9e-53 210 Os06g0296700 AK065533.1 - Hypothetical protein 1e+0 At4g13150 unknown protein C.G. S.X.
0.39 0 2030 Os06g0295500 AK119433.1 - Hypothetical protein 3e-2 At5g66815 unknown protein C.G. S.X.
0.10 1e-20 103 Os06g0293500 AK110449.1 - Hypothetical protein 1e+0 At4g18205 - C.G. S.X.
0.09 6e-17 91 Os06g0295000 9634.m01843 - Hypothetical protein 1e+0 At5g37560 zinc ion binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 9e-2 40 Arabidopsis thaliana At4g27310 828839 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;MOFPBVA - - - C.G. S.X.
0.01 2e+0 36 Glycine max HgAffx.5691.1.S1_at CB826520 - - 2e-1 At5g03740 HD2C (HISTONE DEACETYLASE 2C) C.G. S.X.
0.01 7e-1 36 Hordeum vulgare HW04H17u_s_at HW04H17u - - 2e-1 At5g63740 zinc finger protein-related C.G. S.X.
0.01 1e-1 40 Populus trichocarpa PtpAffx.207468.1.S1_s_at pmrna14824 hypothetical protein - 6e-2 At5g01445 unknown protein C.G. S.X.
0.03 3e-2 42 Triticum aestivum TaAffx.113330.1.S1_at CA602247 - - 6e+0 At3g60410 unknown protein C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1609773_at CB978867 hypothetical protein LOC100261732 - 1e+0 At3g11600 unknown protein C.G. S.X.
0.01 3e+0 34 Zea mays Zm.1067.1.A1_at BM267163 V-type H+-ATPase - 3e-70 At1g75630 AVA-P4 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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