CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0294200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.47 62.3 Os06g0294200 AK119403.1 - Hypothetical protein 4e-1 At4g34600 unknown protein S.X. H.G.
0.75 91.9 Os01g0536400 NM_193243.1 - Isopenicillin N synthase family protein 2e+0 At3g28950 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related S.X. H.G.
0.63 82.7 Os10g0122600 9638.m00247 - Cellular retinaldehyde-binding/triple function,N-terminal domain containing protein 1e-18 At4g36490 SFH12 (SEC14-LIKE 12) S.X. H.G.
0.60 79.7 Os02g0767400 AK072314.1 - Curculin-like (mannose-binding) lectin domaincontaining protein 4e-7 At5g35370 ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding S.X. H.G.
0.53 71.3 Os02g0814500 9630.m05656 - Phosphate starvation regulator protein (Regulatoryprotein of P- starvation acclimation response Psr1) 5e-1 At3g13040 myb family transcription factor S.X. H.G.
0.50 68.0 Os05g0339000 9633.m02481 - VHS domain containing protein 6e-2 At5g46030 unknown protein S.X. H.G.
0.50 68.0 Os12g0640700 AK108649.1 - N/apple PAN domain containing protein 8e-1 At5g44500 small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative S.X. H.G.
0.40 51.1 Os02g0786300 9630.m05407 - Typical P-type R2R3 Myb protein (Fragment) 2e-17 At4g37780 MYB87 (MYB DOMAIN PROTEIN 87) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.7 99.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.7 99.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.8 99.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.0 99.0 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.3 98.9 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.5 98.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.5 98.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.2 98.8 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.6 98.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.0 98.5 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.61 0 741 Os06g0295000 9634.m01843 - Hypothetical protein 1e+0 At5g37560 zinc ion binding C.G. S.X.
0.17 2e-7 59 Os06g0293500 AK110449.1 - Hypothetical protein 1e+0 At4g18205 - C.G. S.X.
0.13 2e-10 69 Os06g0296700 AK065533.1 - Hypothetical protein 1e+0 At4g13150 unknown protein C.G. S.X.
0.12 2e-7 59 Os06g0293100 9634.m01822 - Hypothetical protein 3e-1 At1g43560 Aty2 (Arabidopsis thioredoxin y2) C.G. S.X.
0.11 4e-18 95 Os06g0296900 9634.m01864 - - 2e+0 At5g56520 unknown protein C.G. S.X.
0.09 2e-19 99 Os06g0294000 AK067472.1 - Hypothetical protein 4e-1 At1g68100 IAR1 (IAA-ALANINE RESISTANT 1) C.G. S.X.
0.05 5e-8 61 Os06g0297500 BM038601 - Hypothetical protein 1e+0 At5g55120 VTC5 (VITAMIN C DEFECTIVE 5) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e-1 38 Arabidopsis thaliana At4g34600 829612 unknown protein F:molecular_function unknown;P:unknown;C:endomembrane system;P - - - C.G. S.X.
0.02 2e-3 46 Glycine max GmaAffx.56938.1.S1_at BM178073 - - 3e-6 At4g10480 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative C.G. S.X.
0.02 2e-1 38 Hordeum vulgare Contig14515_at Contig14515 - - 2e+0 At1g43610 NLI interacting factor (NIF) family protein C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.216178.1.S1_at pmrna30796 hypothetical protein - 3e-1 At4g32870 unknown protein C.G. S.X.
0.09 7e-15 83 Triticum aestivum TaAffx.113125.1.S1_at CA617817 - - 2e+1 At5g49510 PDF3 (PREFOLDIN 3) C.G. S.X.
0.01 3e-2 40 Vitis vinifera 1611857_at CA810729 hypothetical protein LOC100261569 - 3e-21 At3g50690 leucine-rich repeat family protein C.G. S.X.
0.01 2e-1 38 Zea mays Zm.15829.1.A1_at AY103873.1 nascent polypeptide-associated complex alpha subunit-like protein - 5e-35 At3g12390 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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