CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0284500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os06g0284500 9634.m01755 - Zn-finger, Dof type domain containing protein 2e-14 At2g37590 Dof-type zinc finger domain-containing protein S.X. H.G.
0.77 93.1 Os11g0201365 9639.m00894 - - 9e+0 At4g32285 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related S.X. H.G.
0.60 79.7 Os08g0362900 9636.m02721 - - 1e+0 At1g25682 cell cycle control protein-related S.X. H.G.
0.57 77.0 Os10g0576200 9638.m03896 - - 8e-1 At2g28920 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.50 68.0 Os09g0271900 9637.m00751 - - 7e-2 At5g04280 glycine-rich RNA-binding protein S.X. H.G.
0.46 60.9 Os08g0315966 9636.m02186 - - 6e-3 At2g24970 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
307.1 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
98.5 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
1.3 87.8 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.9 83.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.9 83.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.8 81.7 GSM261999 IAC165, 2 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
0.8 81.7 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.8 81.7 GSM281588 Rice mutant dst, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
0.7 79.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.6 77.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 5e-44 178 Os01g0865800 AU066081 - AOBP (Ascorbate oxidase promoter-binding protein) 2e-15 At3g52440 Dof-type zinc finger domain-containing protein C.G. S.X.
0.18 1e-41 171 Os05g0440000 9633.m03401 - Zn-finger, Dof type domain containing protein 1e-13 At3g52440 Dof-type zinc finger domain-containing protein C.G. S.X.
0.17 1e-54 214 Os02g0726300 AB028132.1 - Dof zinc finger protein 9e-22 At2g37590 Dof-type zinc finger domain-containing protein C.G. S.X.
0.15 9e-46 184 Os02g0707200 AF542507.1 - The start codon is not identified. 3e-15 At2g37590 Dof-type zinc finger domain-containing protein C.G. S.X.
0.13 4e-57 222 Os03g0764900 AK063380.1 - Zn finger protein (Fragment) 3e-19 At2g37590 Dof-type zinc finger domain-containing protein C.G. S.X.
0.12 1e-41 171 Os02g0673700 AB028130.1 - Zn finger protein (Fragment) 1e-14 At2g37590 Dof-type zinc finger domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 2e-14 79 Arabidopsis thaliana At2g37590 818336 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBFA - - - C.G. S.X.
0.21 1e-40 167 Glycine max GmaAffx.26511.2.S1_at AI441766 Dof4 - 4e-13 At5g60850 OBP4 C.G. S.X.
0.16 9e-46 182 Hordeum vulgare Contig13717_at Contig13717 - - 8e-22 At2g37590 Dof-type zinc finger domain-containing protein C.G. S.X.
0.13 3e-17 89 Populus trichocarpa PtpAffx.68426.1.S1_at CV243359 f-box family protein - 6e-20 At5g60850 OBP4 C.G. S.X.
0.16 4e-25 115 Triticum aestivum TaAffx.90100.1.S1_at CA708031 - - 2e-9 At5g65590 Dof-type zinc finger domain-containing protein C.G. S.X.
0.04 5e-6 50 Vitis vinifera 1615083_at CB914242 - - 1e-38 At4g24060 Dof-type zinc finger domain-containing protein C.G. S.X.
0.16 2e-37 155 Zea mays Zm.94.1.A1_at X79934.1 Dof2 - 1e-7 At2g28810 Dof-type zinc finger domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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