CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0256800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.44 58.1 Os06g0256800 9634.m01451 - Conserved hypothetical protein 4e+0 At4g36660 unknown protein S.X. H.G.
0.57 77.0 Os04g0486300 AK063256.1 - Conserved hypothetical protein 8e-1 At3g61260 DNA-binding family protein / remorin family protein S.X. H.G.
0.55 73.7 Os07g0554200 9635.m03646 - Cyclin-like F-box domain containing protein 6e-1 At4g11120 translation elongation factor Ts (EF-Ts), putative S.X. H.G.
0.39 48.3 Os07g0664900 XM_354050.1 - - 1e+0 At5g38980 unknown protein S.X. H.G.
0.36 44.0 Os11g0192150 9639.m00837 - - 2e+0 At1g01490 heavy-metal-associated domain-containing protein S.X. H.G.
0.36 44.0 Os11g0176600 9639.m00692 - - 5e-1 At4g29460 phospholipase A2 gamma, secretory low molecular weight S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
77.1 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
43.2 99.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.4 99.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.1 99.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.4 99.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.6 99.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.5 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.5 99.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.1 99.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.6 99.1 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 3e-15 83 Os02g0733400 9630.m04903 - Conserved hypothetical protein 1e+0 At4g16240 unknown protein C.G. S.X.
0.03 4e-5 50 Os01g0618000 AK064632.1 - Exonuclease domain containing protein 6e-1 At5g43410 ethylene-responsive factor, putative C.G. S.X.
0.03 3e-2 40 Os01g0820700 9629.m05948 - - 7e+0 At5g64810 WRKY51 C.G. S.X.
0.02 3e-2 40 Os11g0534300 AK069995.1 - The start codon is not identified. 1e-12 At3g26935 zinc finger (DHHC type) family protein C.G. S.X.
0.01 9e-3 42 Os10g0567900 AK064083.1 - F-box protein interaction domain containingprotein 2e-1 At1g41920 - C.G. S.X.
0.01 1e-1 38 Os03g0124100 AK107007.1 - Protein of unknown function DUF604 family protein 4e-6 At1g07850 transferase, transferring glycosyl groups C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At4g36660 829819 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 1e-1 38 Glycine max PsAffx.C282000003_at PsAffx.C282000003 - - 2e-2 At3g59060 PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6) C.G. S.X.
0.04 8e-3 40 Hordeum vulgare AF427791_CDS-2_at AF427791_CDS-2 - - 1e+1 At2g35900 unknown protein C.G. S.X.
0.03 6e+0 32 Populus trichocarpa PtpAffx.210204.1.S1_at pmrna20100 hypothetical protein - 3e-1 At4g02080 ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2) C.G. S.X.
0.04 2e-2 40 Triticum aestivum TaAffx.52898.1.S1_at CA699238 - - 3e-1 At5g47700 60S acidic ribosomal protein P1 (RPP1C) C.G. S.X.
0.03 2e+1 28 Vitis vinifera 1621053_at CF414284 hypothetical protein LOC100258640 - 1e-9 At1g66430 pfkB-type carbohydrate kinase family protein C.G. S.X.
0.05 5e-1 34 Zea mays Zm.2258.1.A1_at AY112615.1 - - 1e+0 At3g49570 LSU3 (RESPONSE TO LOW SULFUR 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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