CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0215000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.78 93.4 Os06g0215000 AK070686.1 - Conserved hypothetical protein 9e-1 At3g42310 unknown protein S.X. H.G.
0.45 58.8 Os03g0675000 AK063092.1 - Conserved hypothetical protein 9e-1 At4g24240 WRKY7 S.X. H.G.
0.41 52.4 Os01g0181400 NM_190755.1 - - 2e+0 At1g27950 LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1) S.X. H.G.
0.40 51.1 Os02g0581700 AK072994.1 - Conserved hypothetical protein 3e-1 At1g12665 - S.X. H.G.
0.39 48.3 Os11g0293400 9630.m02685 - - 2e+0 At5g63480 unknown protein S.X. H.G.
0.37 45.0 Os03g0723800 AK110710.1 - Hypothetical protein 2e-3 At5g05090 myb family transcription factor S.X. H.G.
0.34 40.0 Os12g0521200 9640.m03247 - - 3e-1 At1g63610 unknown protein S.X. H.G.
0.33 38.8 Os01g0305701 NM_189299.1 - - 8e-1 At2g34870 MEE26 (maternal effect embryo arrest 26) S.X. H.G.
0.30 32.7 Os07g0141300 NM_186246.1 - - 7e+0 At5g26890 unknown protein S.X. H.G.
0.29 31.1 Os11g0221800 9639.m01091 - - 9e-1 At2g39020 GCN5-related N-acetyltransferase (GNAT) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
40.2 99.9 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
39.9 99.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
39.5 99.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
37.6 99.8 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.4 99.8 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.2 99.7 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.5 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.0 99.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.4 99.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.8 99.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-19 99 Os09g0343400 AK099726.1 - Hypothetical protein 3e-1 At1g17720 ATB BETA C.G. S.X.
0.03 3e-17 91 Os05g0457000 AK110966.1 - Conserved hypothetical protein 3e-1 At5g14000 anac084 (Arabidopsis NAC domain containing protein 84) C.G. S.X.
0.03 5e-16 87 Os07g0592000 AK107438.1 - Gibberellin regulated protein family protein 4e+0 At5g49420 MADS-box protein (AGL84) C.G. S.X.
0.03 8e-15 83 Os08g0236800 AK067773.1 - Hypothetical protein 6e-1 At4g30980 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.02 1e-16 89 Os08g0233300 AK120342.1 - Conserved hypothetical protein 8e-5 At3g07650 COL9 (CONSTANS-LIKE 9) C.G. S.X.
0.02 2e-15 85 Os12g0285100 AK103843.1 - ARM repeat fold domain containing protein 3e-5 At5g46730 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 9e-1 36 Arabidopsis thaliana At3g42310 823222 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;VMPO - - - C.G. S.X.
0.02 2e-5 52 Glycine max GmaAffx.44482.1.S1_at BE475065 - - 8e-20 At5g42560 abscisic acid-responsive HVA22 family protein C.G. S.X.
0.02 3e-5 50 Hordeum vulgare Contig5815_at Contig5815 - - 5e-3 At2g03870 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.207673.1.S1_at pmrna15233 hypothetical protein - 9e-9 At2g39370 unknown protein C.G. S.X.
0.02 4e-3 44 Triticum aestivum TaAffx.28505.1.S1_at CA659289 - - 3e+0 At5g64800 CLE21 (CLAVATA3/ESR-RELATED 21) C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1621436_at CK138130.1 - - 5e+0 At4g22600 unknown protein C.G. S.X.
0.02 6e-3 42 Zea mays Zm.3238.1.A1_at AW331095 - - 3e-6 At2g18300 basic helix-loop-helix (bHLH) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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