CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0192300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.44 58.1 Os06g0192300 9634.m00877 - - 3e-1 At1g64340 unknown protein S.X. H.G.
0.83 95.8 Os08g0423500 BQ908858 - Carbonic anhydrase, eukaryotic family protein 1e+0 At5g05270 chalcone-flavanone isomerase family protein S.X. H.G.
0.67 87.2 Os05g0365600 CB096565 - Hydroxyisourate hydrolase 2e+0 At3g60130 BGLU16 (BETA GLUCOSIDASE 16) S.X. H.G.
0.60 79.7 Os01g0762300 CA763331 - Conserved hypothetical protein 6e-9 At5g55570 unknown protein S.X. H.G.
0.60 79.7 Os08g0351200 CB677679 - Plant protein of unknown function family protein 1e+1 At4g09490 RNase H domain-containing protein S.X. H.G.
0.46 60.9 Os06g0355900 9636.m00080 - - 1e-1 At3g42310 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
38.3 99.8 GSM267999 Green leaves in F9G RILs from parents lines GSE10872 Molecular characterization and genetic analysis reveal SA0420 as an early senescing rice mutant with pleotropic
17.9 98.9 GSM267998 Yellow leaves in F9Y RILs from parents lines GSE10872 Molecular characterization and genetic analysis reveal SA0420 as an early senescing rice mutant with pleotropic
16.1 98.7 GSM387556 Transgenic line 4, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
15.1 98.6 GSM387557 Transgenic line 4, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
14.8 98.6 GSM387559 Transgenic line 22, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
13.9 98.5 GSM387558 Transgenic line 4, biological rep. 3 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
13.7 98.5 GSM387561 Transgenic line 22, biological rep. 3 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
13.6 98.5 GSM387562 Wild-type, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
13.3 98.4 GSM387563 Wild-type, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
12.9 98.4 GSM387560 Transgenic line 22, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 3e-129 462 Os10g0501500 AK058495.1 - Protein of unknown function DUF607 family protein 1e-8 At2g23790 unknown protein C.G. S.X.
0.10 5e-4 46 Os03g0233000 AK069495.1 - Protein of unknown function DUF607 family protein 1e-2 At5g66650 unknown protein C.G. S.X.
0.06 8e-3 42 Os12g0548700 AK058739.1 - CI2C 1e+0 At4g14805 protease inhibitor/seed storage/lipid transfer protein (LTP)-related C.G. S.X.
0.02 8e-3 42 Os11g0138900 AK059449.1 - Esterase/lipase/thioesterase domain containingprotein 2e-1 At2g05510 glycine-rich protein C.G. S.X.
0.02 8e-3 42 Os11g0258900 AK102638.1 - Conserved hypothetical protein 9e-1 At5g38760 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 36 Arabidopsis thaliana At1g64340 842740 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOB - - - C.G. S.X.
0.04 4e-1 36 Glycine max HgAffx.4397.1.S1_at CD749027 - - 8e-1 At3g24010 ING1 (INHIBITOR OF GROWTH 1) C.G. S.X.
0.04 3e-2 38 Hordeum vulgare Contig223_x_at Contig223 - - 8e-1 At5g56900 CwfJ-like family protein / zinc finger (CCCH-type) family protein C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.5746.4.S1_s_at CV225347 - - 9e-10 At3g02180 SP1L3 (SPIRAL 1-LIKE3) C.G. S.X.
0.06 3e-13 75 Triticum aestivum TaAffx.128772.1.S1_x_at BG605353 - - 2e+0 At2g44740 CYCP4 C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1606748_at CB344298 - - 4e+0 At4g16520 ATG8F (autophagy 8f) C.G. S.X.
0.03 5e-1 34 Zea mays Zm.9560.1.A1_at BM382073 m17 protein - 3e-2 At1g77080 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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