CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0186700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os06g0186700 AK073039.1 - Biopterin transport-related protein BT1 familyprotein 7e-2 At1g79710 integral membrane transporter family protein S.X. H.G.
0.71 89.6 Os07g0695900 AK071940.1 - Myb, DNA-binding domain containing protein 5e-2 At1g75390 AtbZIP44 (Arabidopsis thaliana basic leucine-zipper 44) S.X. H.G.
0.67 87.2 Os06g0181400 9634.m00766 - Conserved hypothetical protein 3e+0 At4g30830 unknown protein S.X. H.G.
0.67 87.2 Os08g0322600 AK069839.1 - UbiA prenyltransferase family protein 1e-9 At4g23660 AtPPT1 (Arabidopsis thaliana polyprenyltransferase 1) S.X. H.G.
0.67 87.2 Os07g0249100 AK066742.1 - Protein prenyltransferase domain containingprotein 5e-7 At3g06920 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.63 82.7 Os12g0610500 AK106471.1 - SAM (and some other nucleotide) binding motifdomain containing protein 2e-11 At1g16650 unknown protein S.X. H.G.
0.63 82.7 Os04g0690400 AK102981.1 - Hypothetical protein 3e-2 At1g49010 myb family transcription factor S.X. H.G.
0.57 77.0 Os11g0456200 AK060974.1 - - 2e+0 At4g36900 RAP2.10 (related to AP2 10) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
104.9 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.6 98.9 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.3 98.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.5 98.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.6 98.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.6 98.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.1 98.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.6 97.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.1 97.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 5e-26 121 Os04g0499100 AK072725.1 - Biopterin transport-related protein BT1 familyprotein 4e+0 At5g47550 cysteine protease inhibitor, putative / cystatin, putative C.G. S.X.
0.04 1e-23 113 Os05g0376400 AK065076.1 - Biopterin transport-related protein BT1 familyprotein 1e-1 At5g10820 integral membrane transporter family protein C.G. S.X.
0.02 2e-16 89 Os09g0423400 AK072133.1 - Biopterin transport-related protein BT1 familyprotein 3e-4 At5g10820 integral membrane transporter family protein C.G. S.X.
0.01 9e-3 44 Os03g0305100 AK101765.1 - Adenosine monophosphate binding protein 1 AMPBP1 7e-5 At3g16910 AAE7 (ACYL-ACTIVATING ENZYME 7) C.G. S.X.
0.01 9e-3 44 Os07g0616700 9635.m04254 - - 1e+0 At2g11005 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 7e-2 40 Arabidopsis thaliana At1g79710 844310 integral membrane transporter family protein F:transporter activity;P:transport;C:membrane;OPBA - - - C.G. S.X.
0.02 4e-1 38 Glycine max PsAffx.C2000288_at PsAffx.C2000288 - - 1e+0 At5g17870 PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6) C.G. S.X.
0.01 4e-2 40 Hordeum vulgare Contig9844_at Contig9844 - - 3e-1 At5g24860 FPF1 (FLOWERING PROMOTING FACTOR 1) C.G. S.X.
0.10 2e-9 65 Populus trichocarpa PtpAffx.200076.1.S1_at pmrna138 hypothetical protein - 3e-12 At1g79710 integral membrane transporter family protein C.G. S.X.
0.07 3e-10 67 Triticum aestivum TaAffx.58364.1.S1_at CA620231 - - 2e+1 At4g10610 CID12 C.G. S.X.
0.03 4e-4 46 Vitis vinifera 1608605_at CF205162.1 hypothetical protein LOC100261254 - 1e-10 At5g25050 integral membrane transporter family protein C.G. S.X.
0.12 1e-29 131 Zea mays Zm.19141.1.A1_at CF625022 - - 2e+0 At3g01950 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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