CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0186600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os06g0186600 AK099819.1 - Conserved hypothetical protein 2e-16 At4g30780 unknown protein S.X. H.G.
0.57 77.0 Os03g0268200 AK069243.1 - Protein kinase domain containing protein 3e-1 At2g37840 protein kinase family protein S.X. H.G.
0.56 76.3 Os01g0846900 AK101755.1 - Transcription initiation factor TFIID domaincontaining protein 3e-4 At1g17440 EER4 (ENHANCED ETHYLENE RESPONSE 4) S.X. H.G.
0.47 62.3 Os02g0137500 CB636214 - HAC4 (Fragment) 2e-12 At1g79000 HAC1 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1) S.X. H.G.
0.42 53.9 Os01g0148000 CB642477 - Zn-finger (putative), N-recognin domain containingprotein 3e-12 At5g02310 PRT6 (PROTEOLYSIS 6) S.X. H.G.
0.42 53.9 Os09g0525600 AK063524.1 - UBX domain containing protein 2e-11 At4g11740 SAY1 S.X. H.G.
0.39 48.3 Os01g0246100 AK120732.1 - Protein of unknown function DUF902 domaincontaining protein 2e-3 At1g79000 HAC1 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1) S.X. H.G.
0.39 48.3 Os07g0461600 AK121366.1 - TA7 protein (Fragment) 1e+0 At2g19890 unknown protein S.X. H.G.
0.32 36.3 Os05g0224800 AK111685.1 - Chromomethylase 3 2e-1 At4g19020 CMT2 (chromomethylase 2) S.X. H.G.
0.27 27.5 Os12g0110000 AY491431.1 - Regulatory associated protein of TOR familyprotein 3e-52 At3g08850 RAPTOR1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.8 97.6 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
6.1 97.1 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
5.6 96.9 GSM302916 endo6D_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
5.6 96.9 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.6 96.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.5 96.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.2 96.0 GSM195229 Endosperm GSE7951 Genome-wide gene expression profiling of rice stigma
3.3 95.1 GSM195224 Suspension cell GSE7951 Genome-wide gene expression profiling of rice stigma
3.3 95.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.0 94.6 GSM159212 Seed (S2, 3 - 4 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-6 56 Os09g0128400 AK103118.1 - Conserved hypothetical protein 5e-18 At2g24100 unknown protein C.G. S.X.
0.01 6e-5 52 Os01g0207200 AK103341.1 - Conserved hypothetical protein 2e-8 At3g14920 unknown protein C.G. S.X.
0.01 6e-5 52 Os02g0549200 AK069491.1 - Ser Thr specific protein kinase-like protein 3e-16 At1g01540 protein kinase family protein C.G. S.X.
0.01 3e-4 50 Os05g0596600 AK107823.1 - SMC protein, N-terminal domain containing protein 6e-28 At5g15920 structural maintenance of chromosomes (SMC) family protein (MSS2) C.G. S.X.
0.01 3e-4 50 Os09g0558900 AK102060.1 - NADPH-cytochrome P450 oxidoreductase (EC 1.-.-.-) 6e-15 At4g24520 ATR1 (ARABIDOPSIS P450 REDUCTASE 1) C.G. S.X.
0.01 3e-4 50 Os11g0150200 AK119270.1 - Plant protein of unknown function DUF868 familyprotein 4e-1 At3g18790 - C.G. S.X.
0.01 1e-3 48 Os08g0113200 AK102710.1 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 4e-1 At5g15790 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e-16 89 Arabidopsis thaliana At4g30780 829201 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO - - - C.G. S.X.
0.07 4e-24 115 Glycine max GmaAffx.46198.3.S1_at BM143208 - - 2e-31 At4g30780 unknown protein C.G. S.X.
0.37 2e-162 573 Hordeum vulgare Contig6486_at Contig6486 - - 8e-23 At4g30780 unknown protein C.G. S.X.
0.09 5e-20 101 Populus trichocarpa PtpAffx.4403.1.S1_a_at CV278254 hypothetical protein - 7e-45 At4g30780 unknown protein C.G. S.X.
0.32 1e-146 521 Triticum aestivum Ta.1311.2.S1_a_at CA642245 - - 6e-14 At2g24100 unknown protein C.G. S.X.
0.08 8e-28 125 Vitis vinifera 1616017_at CB982105 - - 9e-14 At2g24100 unknown protein C.G. S.X.
0.20 2e-60 234 Zea mays Zm.8407.1.A1_at BM073991 hypothetical protein LOC100275560 - 2e+0 At5g37415 sequence-specific DNA binding / transcription factor C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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