CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0182300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.69 87.9 Os06g0182300 AK100271.1 - Callose synthase 1 catalytic subunit 3e-62 At2g13680 CALS5 (CALLOSE SYNTHASE 5) S.X. H.G.
0.74 91.4 Os11g0291100 9639.m01729 - - 8e-1 At3g49120 PRXCB (PEROXIDASE CB) S.X. H.G.
0.63 82.7 Os01g0782800 9629.m05620 - Conserved hypothetical protein 3e+0 At2g29360 tropinone reductase, putative / tropine dehydrogenase, putative S.X. H.G.
0.62 81.5 Os05g0229100 9636.m02191 - - 5e-1 At2g43510 ATTI1 S.X. H.G.
0.61 81.2 Os01g0556600 NM_193463.1 - Nucleic acid-binding OB-fold domain containingprotein 9e-1 At5g41190 - S.X. H.G.
0.57 77.0 Os07g0261900 9635.m01567 - - 1e+1 At5g65300 unknown protein S.X. H.G.
0.56 76.3 Os02g0684100 9630.m04455 - Sulfotransferase family protein 3e+0 At4g15690 glutaredoxin family protein S.X. H.G.
0.56 76.3 Os11g0553500 9639.m03156 - Protein kinase domain containing protein 2e-1 At5g15080 protein kinase, putative S.X. H.G.
0.54 71.9 Os05g0306400 9633.m02144 - - 3e+0 At2g20616 unknown protein S.X. H.G.
0.52 69.6 Os12g0108600 9640.m00078 - Protein phosphatase 2C-like domain containingprotein 5e-2 At4g32950 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
33.0 99.8 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.0 99.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.4 99.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
29.7 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.9 99.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.9 99.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.8 99.4 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.4 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.4 99.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.4 99.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 8e-18 95 Os06g0728800 9634.m04991 - Callose synthase 1 catalytic subunit 4e-54 At5g13000 ATGSL12 (glucan synthase-like 12) C.G. S.X.
0.06 2e-33 147 Os01g0533500 AK064446.1 - Callose synthase 1 catalytic subunit 7e-8 At5g13000 ATGSL12 (glucan synthase-like 12) C.G. S.X.
0.06 2e-21 107 Os01g0532900 NM_193203.1 - Callose synthase 1 catalytic subunit 1e-12 At1g06490 ATGSL07 (glucan synthase-like 7) C.G. S.X.
0.04 7e-52 208 Os01g0899300 NM_190295.1 - - 6e-54 Atcg00480 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 3e-62 242 Arabidopsis thaliana At2g13680 815852 CALS5 (CALLOSE SYNTHASE 5) Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen. - - - C.G. S.X.
0.04 8e-11 71 Glycine max GmaAffx.33645.1.S1_at BU964672 - - 1e-58 At3g07160 ATGSL10 (glucan synthase-like 10) C.G. S.X.
0.07 5e-16 87 Hordeum vulgare Contig4949_at Contig4949 - - 3e-53 At5g13000 ATGSL12 (glucan synthase-like 12) C.G. S.X.
0.37 1e-89 333 Populus trichocarpa PtpAffx.222676.1.S1_at pmrna40232 hypothetical protein - 4e-95 At2g13680 CALS5 (CALLOSE SYNTHASE 5) C.G. S.X.
0.03 2e-23 113 Triticum aestivum Ta.26122.1.A1_at CD452820 1,3-beta-glucan synthase 19-like - 2e-3 At2g13680 CALS5 (CALLOSE SYNTHASE 5) C.G. S.X.
0.01 2e-1 38 Vitis vinifera 1613862_at CF211656 hypothetical protein LOC100256340 - 7e-48 At5g13000 ATGSL12 (glucan synthase-like 12) C.G. S.X.
0.12 4e-19 97 Zea mays Zm.13598.1.A1_at AY107727.1 - - 2e-27 At5g13000 ATGSL12 (glucan synthase-like 12) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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