Gene omics information

Query gene ID Os06g0160500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6987.9Os06g0160500NM_185617.1--1e-1At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)S.X.H.G.
0.7289.8Os09g04431009637.m02373--2e+0At4g32110transferase, transferring glycosyl groupsS.X.H.G.
0.7289.8Os06g06252009634.m04048-Protein kinase domain containing protein6e-2At2g15440unknown proteinS.X.H.G.
0.6787.2Os03g04524009631.m03344--2e+0At4g22250zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.6483.4Os04g05122009632.m04147-CER12e+0At5g15290integral membrane family proteinS.X.H.G.
0.6382.7Os10g03612009638.m01818--5e-3At1g30740FAD-binding domain-containing proteinS.X.H.G.
0.6181.2Os06g03512009634.m02404--2e+0At1g10747-S.X.H.G.
0.5676.3Os10g01482009638.m00489--3e+0At2g32210unknown proteinS.X.H.G.
0.5573.7Os11g0198900AK107759.1-Hypothetical protein6e+0At5g38800AtbZIP43 (Arabidopsis thaliana basic leucine-zipper 43)S.X.H.G.
0.4863.7Os04g03932009632.m03074--1e-1At4g24160hydrolase, alpha/beta fold family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
129.5100.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
54.099.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
25.399.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.099.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.399.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.198.9GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.898.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.498.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.098.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.798.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.129e-2099Os03g0150200AY339376.1-Ethylene-responsive element binding protein8e-2At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
0.113e-1687Os04g05475009632.m04453--5e-4At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)C.G.S.X.
0.111e-1585Os06g06360009634.m04148--9e-3At1g71130AP2 domain-containing transcription factor, putativeC.G.S.X.
0.102e-1791Os02g0654700AK073812.1-Ethylene-responsive element binding protein3e-3At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)C.G.S.X.
0.095e-1893Os04g0547600AY339379.1-Pathogenesis-related transcriptional factor andERF domain containing protein3e-3At4g27950CRF4 (CYTOKININ RESPONSE FACTOR 4)C.G.S.X.
0.095e-1583Os04g0257500AK107745.1-Ethylene-responsive element binding protein7e-3At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
0.083e-1687Os12g0168100AK107125.1-AP2 domain containing protein RAP2.6 (Fragment)1e-5At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.075e-21103Os01g0224100AK106517.1-Ethylene-responsive element binding factor4e-3At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-138Arabidopsis thalianaAt1g06160837125ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.---C.G.S.X.
0.083e-654Glycine maxGmaAffx.92135.1.S1_s_atCF807860--2e-2At3g20310ERF7 (ETHYLINE RESPONSE FACTOR 7)C.G.S.X.
0.123e-756Hordeum vulgareContig2481_s_atContig2481--8e-6At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.043e-344Populus trichocarpaPtpAffx.221100.1.S1_atpmrna37697AP2/ERF domain-containing transcription factor-9e-20At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)C.G.S.X.
0.086e-756Triticum aestivumTaAffx.128540.1.S1_atCA644450--2e+0At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.041e-240Vitis vinifera1611910_s_atAY395745.1similar to putative ethylene response factor ERF3b-9e-14At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)C.G.S.X.
0.143e-1065Zea maysZm.18520.1.A1_atCF632042--8e-3At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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