CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0147000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os06g0147000 AK120978.1 - Conserved hypothetical protein 3e-1 At4g28830 methyltransferase/ nucleic acid binding S.X. H.G.
0.67 87.2 Os05g0457200 9633.m03549 - Protein phosphatase-2C 2e-7 At1g07430 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
0.59 78.0 Os09g0555500 AK108154.1 - Phytoene synthase (Fragment) 8e-4 At5g17230 phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase S.X. H.G.
0.57 77.0 Os07g0687900 D26537.1 - WSI76 protein induced by water stress 4e-24 At1g09350 AtGolS3 (Arabidopsis thaliana galactinol synthase 3) S.X. H.G.
0.53 71.3 Os07g0154100 AK119780.1 - The start codon is not identified. 3e-4 At3g14440 NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3) S.X. H.G.
0.50 68.0 Os03g0125100 9631.m00248 - Beta-carotene hydroxylase 1e-11 At5g52570 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2) S.X. H.G.
0.38 46.9 Os12g0478200 AK063578.1 - GRAM domain containing protein 4e-4 At5g23360 GRAM domain-containing protein / ABA-responsive protein-related S.X. H.G.
0.33 38.8 Os01g0846300 AK065949.1 - Protein phpsphatase 2C (PP2C) (EC 3.1.3.16) 9e-1 At5g59220 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
82.1 99.9 GSM278855 KT95-418-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
38.2 99.8 GSM159264 Drought stress, biological rep 3 GSE6901 Expression data for stress treatment in rice seedlings
34.2 99.8 GSM159262 Drought stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
30.9 99.7 GSM159263 Drought stress, biological rep 2 GSE6901 Expression data for stress treatment in rice seedlings
28.1 99.6 GSM278849 WuYun3-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
18.7 99.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
14.8 98.6 GSM278846 WuYun3-RSV infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
7.5 97.5 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
6.8 97.3 GSM159265 Salt stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
6.5 97.2 GSM159266 Salt stress, biological rep 2 GSE6901 Expression data for stress treatment in rice seedlings
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 9e-43 174 Os06g0146900 AK071352.1 - Hypothetical protein 1e-1 At4g26490 - C.G. S.X.
0.08 1e-4 48 Os06g0146800 AK121050.1 - Conserved hypothetical protein 5e+0 At3g28930 AIG2 (AVRRPT2-INDUCED GENE 2) C.G. S.X.
0.04 4e-2 40 Os04g0116900 9632.m00170 - Conserved hypothetical protein 2e-2 At5g23100 unknown protein C.G. S.X.
0.03 2e-9 63 Os02g0689200 AK065336.1 - Protein of unknown function DUF250 domaincontaining protein 3e-2 At1g44750 ATPUP11 C.G. S.X.
0.03 8e-3 42 Os09g0493000 AK107737.1 - Conserved hypothetical protein 2e+0 At3g44950 glycine-rich protein C.G. S.X.
0.02 5e-4 46 Os09g0516600 AK103563.1 - Glyoxalase II 2e-7 At1g06130 GLX2-4 (glyoxalase 2-4) C.G. S.X.
0.02 3e-2 40 Os06g0701500 9634.m04750 - - 4e-3 At4g36780 transcription regulator C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 36 Arabidopsis thaliana At4g28830 829004 methyltransferase/ nucleic acid binding F:methyltransferase activity, nucleic acid binding;P:methylation;C:cellular_component unknown;BOAMPF - - - C.G. S.X.
0.04 1e-1 38 Glycine max HgAffx.22156.1.S1_at BI396924 - - 1e-2 At1g54215 proline-rich family protein C.G. S.X.
0.03 1e-1 36 Hordeum vulgare Contig10262_at Contig10262 - - 5e+0 At4g32090 galactosyltransferase C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.210962.1.S1_s_at pmrna21538 hypothetical protein - 3e-2 At5g56600 PRF3 (PROFILIN 3) C.G. S.X.
0.04 7e-2 38 Triticum aestivum Ta.24721.1.S1_at CA694874 - - 4e+0 At4g30620 unknown protein C.G. S.X.
0.03 3e-1 34 Vitis vinifera 1614969_at CA810356 hypothetical protein LOC100252305 - 3e+0 At4g00390 transcription regulator C.G. S.X.
0.09 3e-8 57 Zea mays Zm.9932.1.A1_at CF005271 hypothetical protein LOC100278059 - 3e-1 At1g76240 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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