CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0128100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.92 99.1 Os06g0128100 CA766672 - Putative methyltransferase DUF248 family protein 2e-8 At2g45750 dehydration-responsive family protein S.X. H.G.
0.31 34.5 Os04g0570700 AK063032.1 - Hypothetical protein 2e-2 At3g56380 ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17) S.X. H.G.
0.29 31.1 Os01g0605000 AK110890.1 - - 4e-3 At5g17730 AAA-type ATPase family protein S.X. H.G.
0.23 21.2 Os01g0870300 AB083582.1 - Ammonium transporter 2e-3 At2g38290 ATAMT2 (AMMONIUM TRANSPORTER 2) S.X. H.G.
0.22 19.4 Os02g0213900 9630.m01112 - - 7e-1 At1g01500 unknown protein S.X. H.G.
0.17 12.6 Os05g0324300 AK067550.1 - - 5e-1 At2g02026 unknown protein S.X. H.G.
0.08 4.2 Os03g0386600 AK069441.1 - Conserved hypothetical protein 3e-2 At3g63470 scpl40 (serine carboxypeptidase-like 40) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
37.6 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
35.2 99.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.6 99.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.3 99.5 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.7 99.4 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.9 99.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.6 99.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.4 99.2 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.4 99.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 2e-15 85 Os04g0570800 AK099906.1 - Putative methyltransferase DUF248 family protein 1e-4 At4g00750 dehydration-responsive family protein C.G. S.X.
0.06 3e-14 81 Os11g0186300 AK109545.1 - Putative methyltransferase DUF248 family protein 2e-9 At2g34300 dehydration-responsive protein-related C.G. S.X.
0.04 9e-15 83 Os06g0712800 AK121236.1 - Ankyrin-like protein 1e+0 At5g61270 PIF7 (PHYTOCHROME-INTERACTING FACTOR7) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 2e-8 61 Arabidopsis thaliana At2g45750 819183 dehydration-responsive family protein F:unknown;P:biological_process unknown;C:unknown;PBO - - - C.G. S.X.
0.10 6e-9 63 Glycine max GmaAffx.41555.1.S1_at AW781650 - - 3e-16 At2g45750 dehydration-responsive family protein C.G. S.X.
0.19 2e-28 127 Hordeum vulgare Contig4811_at Contig4811 - - 5e-3 At2g45750 dehydration-responsive family protein C.G. S.X.
0.06 1e-3 46 Populus trichocarpa PtpAffx.213065.1.S1_at pmrna25567 hypothetical protein - 1e-30 At4g00750 dehydration-responsive family protein C.G. S.X.
0.09 6e-2 40 Triticum aestivum TaAffx.9851.1.S1_at BJ314167 Dehydration-induced protein - 8e-19 At1g33170 dehydration-responsive family protein C.G. S.X.
0.01 2e+1 30 Vitis vinifera 1619519_at CB971445 hypothetical protein LOC100250171 - 1e+0 At4g37200 HCF164 C.G. S.X.
0.05 2e-9 63 Zea mays Zm.1344.1.A1_at CA402844 - - 9e-7 At4g00750 dehydration-responsive family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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