CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0127600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os06g0127600 AK073855.1 - Conserved hypothetical protein 2e-6 At4g10770 OPT7 (OLIGOPEPTIDE TRANSPORTER 7) S.X. H.G.
0.71 89.6 Os03g0424000 AK067340.1 - Protein kinase domain containing protein 5e-4 At3g61390 U-box domain-containing protein S.X. H.G.
0.60 79.7 Os02g0699800 AK108578.1 - Conserved hypothetical protein 9e+0 At5g02920 ubiquitin-protein ligase S.X. H.G.
0.40 51.1 Os02g0164600 AK103682.1 - Protein prenyltransferase domain containingprotein 7e-2 At4g33990 EMB2758 (embryo defective 2758) S.X. H.G.
0.30 32.7 Os07g0553600 AK064506.1 - Conserved hypothetical protein 3e-2 At1g20650 ATP binding / protein kinase/ protein serine/threonine kinase S.X. H.G.
0.22 19.4 Os09g0570600 AK103632.1 - PAP/25A core domain containing protein 1e+0 At2g41860 CPK14 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
33.2 99.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.0 99.7 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.9 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.6 99.5 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.7 99.4 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.6 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.4 99.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.4 99.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.0 99.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.7 99.1 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 0 1905 Os06g0127700 AK072617.1 - - 2e-6 At4g10770 OPT7 (OLIGOPEPTIDE TRANSPORTER 7) C.G. S.X.
0.14 1e-73 280 Os06g0125300 AK109698.1 - - 3e-4 At5g53510 ATOPT9 (ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 9) C.G. S.X.
0.13 2e-118 428 Os06g0125500 AK067671.1 - - 6e-18 At4g10770 OPT7 (OLIGOPEPTIDE TRANSPORTER 7) C.G. S.X.
0.03 4e-15 85 Os02g0695900 AK062910.1 - Hypothetical protein 2e+0 At5g40690 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-6 56 Arabidopsis thaliana At4g10770 826672 OPT7 (OLIGOPEPTIDE TRANSPORTER 7) oligopeptide transporter - - - C.G. S.X.
0.01 2e-1 40 Glycine max PsAffx.C159000015_at PsAffx.C159000015 - - 9e-2 At5g12010 unknown protein C.G. S.X.
0.04 4e-9 63 Hordeum vulgare HVSMEl0002G04r2_at HVSMEl0002G04r2 - - 8e+0 Atmg01220 - C.G. S.X.
0.06 7e-10 67 Populus trichocarpa PtpAffx.203320.1.S1_at pmrna6601 oligopeptide transporter OPT family - 7e-39 At4g10770 OPT7 (OLIGOPEPTIDE TRANSPORTER 7) C.G. S.X.
0.05 3e-24 115 Triticum aestivum Ta.25328.1.A1_at CD454884 - - 3e-2 At3g23250 MYB15 (MYB DOMAIN PROTEIN 15) C.G. S.X.
0.01 2e-3 44 Vitis vinifera 1613916_at CF404702 hypothetical protein LOC100250922 - 1e-24 At5g64410 OPT4 (OLIGOPEPTIDE TRANSPORTER 4) C.G. S.X.
0.02 2e-13 77 Zea mays Zm.16913.1.S1_at BQ619268 GT1 protein - 2e-24 At4g16370 ATOPT3 (OLIGOPEPTIDE TRANSPORTER) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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