CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0119600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os06g0119600 AK066409.1 - Peptidase aspartic family protein 1e+0 At5g10760 aspartyl protease family protein S.X. H.G.
0.57 77.0 Os11g0653300 AK119392.1 - Hypothetical protein 3e-2 At3g21710 unknown protein S.X. H.G.
0.44 58.1 Os11g0661600 AK108713.1 - Peroxidase precursor (EC 1.11.1.7) 3e-3 At5g15180 peroxidase, putative S.X. H.G.
0.29 31.1 Os11g0661900 AK064062.1 - Hypothetical protein 8e-1 At5g57640 - S.X. H.G.
0.25 24.1 Os12g0628400 AK061110.1 - Fatty acid hydroxylase domain containing protein 1e-8 At4g20870 FAH2 (FATTY ACID HYDROXYLASE 2) S.X. H.G.
0.05 2.5 Os10g0150800 AK061299.1 - Protein of unknown function DUF1210 family protein 2e+0 At5g14340 AtMYB40 (myb domain protein 40) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
43.4 99.9 GSM99858 TCHW P1_m103 control, biological rep1 GSE4438 Expression data from rice under salinity stress
35.7 99.8 GSM99859 TCHW P2_m103 control, biological rep2 GSE4438 Expression data from rice under salinity stress
35.5 99.8 GSM99860 TCHW P3_m103 control, biological rep3 GSE4438 Expression data from rice under salinity stress
31.4 99.7 GSM429983 Rice mutant phoenix (pho) panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
30.2 99.7 GSM99861 TCHW P4_m103 salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
28.1 99.6 GSM99863 TCHW P6_m103 salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
22.8 99.3 GSM99862 TCHW P5_m103 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
20.0 99.1 GSM99874 TCHW P17_agami salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
19.3 99.0 GSM99875 TCHW P18_agami salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
17.7 98.9 GSM429982 Rice wild-type panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.61 0 676 Os06g0118000 AK061513.1 - Peptidase aspartic family protein 2e+0 At4g00430 PIP1 C.G. S.X.
0.20 2e-9 65 Os01g0608300 9629.m04055 - Peptidase A1, pepsin family protein 3e+0 At5g21170 5'-AMP-activated protein kinase beta-2 subunit, putative C.G. S.X.
0.15 5e-10 67 Os02g0720600 AK101967.1 - Peptidase A1, pepsin family protein 3e+0 At4g14104 unknown protein C.G. S.X.
0.05 4e-26 121 Os05g0531300 9634.m00196 - - 3e-1 At3g17160 unknown protein C.G. S.X.
0.02 3e-8 61 Os09g0482300 AK108029.1 - Conserved hypothetical protein 3e+0 At1g21770 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 36 Arabidopsis thaliana At5g10760 830943 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast;PMFO - - - C.G. S.X.
0.02 3e-1 38 Glycine max GmaAffx.61457.1.A1_at CD405281 - - 1e-2 At3g13500 unknown protein C.G. S.X.
0.08 5e-7 56 Hordeum vulgare Contig6013_at Contig6013 - - 4e+0 At4g29020 glycine-rich protein C.G. S.X.
0.01 1e+0 36 Populus trichocarpa PtpAffx.206429.1.S1_at pmrna12766 hypothetical protein - 3e+0 At1g28710 unknown protein C.G. S.X.
0.08 2e-8 61 Triticum aestivum TaAffx.21249.1.S1_at CA706624 - - 3e+1 At5g07550 GRP19 (GLYCINE-RICH PROTEIN 19) C.G. S.X.
0.02 4e+0 32 Vitis vinifera 1621177_at CF215740 hypothetical protein LOC100258972 - 4e+0 At1g48325 Expressed protein C.G. S.X.
0.02 7e-6 52 Zea mays Zm.1716.1.S1_at AW400197 RALF - 4e-1 At5g19875 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006508 The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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