CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os06g0111901

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os06g0111901 NM_185397.1 - - 3e-1 At1g71740 unknown protein S.X. H.G.
0.80 94.6 Os02g0732400 AK107003.1 - ZIM domain containing protein 4e+0 At2g34380 - S.X. H.G.
0.71 89.6 Os06g0330000 9634.m02201 - - 7e-1 At1g75690 chaperone protein dnaJ-related S.X. H.G.
0.67 87.2 Os11g0552300 9639.m03151 - - 1e-1 At5g60680 unknown protein S.X. H.G.
0.60 79.7 Os08g0340850 9636.m02478 - - 4e-1 At2g37950 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.50 68.0 Os08g0454500 9636.m03547 - Flavonoid 7-O-methyltransferase (EC 2.1.1.6) 8e+0 At5g05380 PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
38.9 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.1 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.1 99.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.4 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.4 99.6 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.0 99.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.0 99.5 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.7 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-1 36 Os07g0132600 9631.m02107 - - 5e+0 At2g25770 unknown protein C.G. S.X.
0.04 5e+0 32 Os05g0301300 9633.m02092 - - 3e-1 At1g66540 cytochrome P450, putative C.G. S.X.
0.03 6e-1 34 Os03g0328501 9635.m00330 - - 1e-1 At5g08330 TCP family transcription factor, putative C.G. S.X.
0.03 6e-1 34 Os08g0243600 AB110183.1 - Haloacid dehalogenase-like hydrolase domaincontaining protein 4e-11 At4g25840 GPP1 (glycerol-3-phosphatase 1) C.G. S.X.
0.03 1e+0 34 Os10g0378025 NM_196167.1 - - 4e+0 At5g50915 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.02 5e+0 32 Os03g0567300 NM_184757.1 - - 2e+0 At3g44940 unknown protein C.G. S.X.
0.01 1e-1 36 Os12g0552900 AK101637.1 - Disease resistance protein family protein 4e-1 At4g09340 SPla/RYanodine receptor (SPRY) domain-containing protein C.G. S.X.
0.01 1e+0 34 Os02g0720900 AK069691.1 - Peptidase A1, pepsin family protein 1e+0 At5g41460 fringe-related protein C.G. S.X.
0.01 5e+0 32 Os07g0134600 9635.m00351 - Protein kinase domain containing protein 1e-3 At2g16250 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.01 5e+0 32 Os11g0474800 AK108710.1 - Terpene synthase-like domain containing protein 2e-1 At5g23950 C2 domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 3e-1 34 Arabidopsis thaliana At1g71740 843504 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.06 4e-1 34 Glycine max HgAffx.3504.1.A1_at CK349186 - - 1e+1 At5g28288 - C.G. S.X.
0.05 2e+0 30 Hordeum vulgare HA03B13u_s_at HA03B13u - - 8e-4 At5g67560 ATARLA1D (ADP-ribosylation factor-like A1D) C.G. S.X.
0.06 4e-1 34 Populus trichocarpa Ptp.501.1.A1_at CK087671 - - 2e-1 At5g63710 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.10 1e+0 32 Triticum aestivum TaAffx.5149.1.S1_at CA720699 - - 9e+0 At4g37290 unknown protein C.G. S.X.
0.06 1e-3 40 Vitis vinifera 1613413_at BQ799171 hypothetical protein LOC100261579 - 7e-2 At2g04795 unknown protein C.G. S.X.
0.06 5e-1 32 Zea mays ZmAffx.162.1.A1_at AI668180 Hypothetical protein LOC100193115 - 2e-1 At2g27240 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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