Gene omics information

Query gene ID	Os06g0102100
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.9	Os06g0102100	AK099468.1	-	Cytochrome P450 family protein	1e+0	At5g46020	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.91	98.9	Os06g0288200	AK071127.1	-	Hypothetical protein	8e-1	At2g47400	CP12-1	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.91	98.9	Os07g0510500	AK068586.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	4e-3	At3g21800	UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.77	93.1	Os02g0697400	AK105636.1	-	4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2)(4-coumaroyl-CoA synthase 2)	8e-5	At1g65060	4CL3	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.77	93.1	Os02g0589000	AK066288.1	-	Lecithin:cholesterol acyltransferase familyprotein	8e-1	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.67	87.2	Os12g0115700	AK099443.1	-	Chalcone-flavanone isomerase family protein	3e+0	At4g04745	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.0	98.6	GSM421721	MOCK, 24 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.6	98.6	GSM421681	XOC, 24 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.6	98.6	GSM421719	MOCK, 24 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.3	98.6	GSM421701	XOO, 24 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.3	98.6	GSM421720	MOCK, 24 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.5	98.5	GSM421723	MOCK, 96 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.4	98.5	GSM421700	XOO, 24 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.2	98.4	GSM195218	stigma 1, biological rep1	GSE7951	Genome-wide gene expression profiling of rice stigma
13.1	98.4	GSM421679	XOC, 24 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.9	98.4	GSM421683	XOC, 96 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.19	1e-26	123	Os04g0101400	AK100972.1	-	Cytochrome P450 family protein	1e-2	At5g06900	CYP93D1	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.06	2e-6	56	Os06g0613600	9634.m03950	-	Cytochrome P450 family protein	3e+0	At4g13195	CLE44 (CLAVATA3/ESR-RELATED 44)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.04	5e-4	48	Os05g0320700	AK100598.1	-	Trans-cinnamate 4-monooxygenase (EC 1.14.13.11)(Cinnamic acid 4- hydroxylase) (CA4H) (C4H) (P450C4H)(Cytochrome P450 73)	2e-14	At2g30490	C4H (CINNAMATE-4-HYDROXYLASE)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.03	3e-5	52	Os06g0599200	AU095771	-	Cytochrome P450 family protein	6e+0	At5g51720	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	5e-7	57	Os01g0561600	AK069494.1	-	Cytochrome P450 family protein	4e+0	At1g54740	-	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	3e-5	52	Os02g0569400	AK060722.1	-	Cytochrome P450 family protein	4e+0	At2g01590	CRR3 (CHLORORESPIRATORY REDUCTION 3)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	1e-4	50	Os01g0820000	9629.m05941	-	Trans-cinnamate 4-monooxygenase (EC 1.14.13.11)(Cinnamic acid 4- hydroxylase) (CA4H) (C4H) (P450C4H)(Cytochrome P450 73)	1e-17	At2g30490	C4H (CINNAMATE-4-HYDROXYLASE)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	1e-4	50	Os05g0161200	AB042936.1	-	Chloroplast RelA homologue 2	1e+0	At4g34670	40S ribosomal protein S3A (RPS3aB)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	1e+0	36	Arabidopsis thaliana	At5g46020	834642	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e-3	46	Glycine max	GmaAffx.51195.1.S1_at	BM887103	-	-	2e-1	At1g70700	TIFY7	C.G.	S.X.	Please select
0.18	3e-45	182	Hordeum vulgare	HV_CEb0006P14r2_at	HV_CEb0006P14r2	-	-	3e-1	At5g46020	unknown protein	C.G.	S.X.	Please select
0.02	9e-2	40	Populus trichocarpa	PtpAffx.220531.1.S1_at	pmrna36935	-	-	2e-1	At3g15450	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.13	4e-37	157	Triticum aestivum	Ta.8802.1.A1_at	BQ162428	-	-	4e+0	At2g20820	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Vitis vinifera	1615445_at	BQ794327	-	-	5e-3	At5g02380	MT2B (METALLOTHIONEIN 2B)	C.G.	S.X.	Please select
0.08	3e-11	69	Zea mays	Zm.10403.1.S1_at	CO531512	hypothetical protein LOC100272497	-	1e-3	At2g38610	KH domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name
L	GO:0022900	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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