Gene omics information

Query gene ID Os05g0585500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7793.1Os05g0585500AK070346.1-Calcium-dependent protein kinase1e-12At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)S.X.H.G.
0.6787.2Os05g0473500AK101630.1-Exo70 exocyst complex subunit family protein5e+0At2g48130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.5068.0Os03g0239200AK100953.1-Arabidopsis thaliana 130.7kDa hypothetical proteinfamily protein1e-10At1g14740unknown proteinS.X.H.G.
0.4458.1Os02g0827200AB091673.1-Sucrose transporter1e-18At2g02860SUT2 (SUCROSE TRANSPORTER 2)S.X.H.G.
0.4051.1Os03g0786000AK061286.1-Conserved hypothetical protein3e+0At3g07560PEX13 (PEROXIN 13)S.X.H.G.
0.2727.5Os09g0493700AK099237.1-No apical meristem (NAM) protein domain containingprotein3e-1At5g18270ANAC087S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.497.5GSM159200Inflorescence (P4, 10 - 15 cm), biological rep 3GSE6893Expression data for reproductive development in rice
7.097.4GSM159191Young inflorescence (P1, upto 3 cm), biological rep 3GSE6893Expression data for reproductive development in rice
6.897.3GSM159189Young inflorescence (P1, upto 3 cm), biological rep 1GSE6893Expression data for reproductive development in rice
6.597.2GSM375765gid1-3_ shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
6.397.2GSM375766gid1-3_ shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
5.796.9GSM375767gid1-3_ shoot_replicate 3GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
5.496.8GSM159198Inflorescence (P4, 10 - 15 cm), biological rep 1GSE6893Expression data for reproductive development in rice
5.396.7GSM159197Inflorescence (P3, 5 - 10 cm), biological rep 3GSE6893Expression data for reproductive development in rice
5.196.6GSM159196Inflorescence (P3, 5 - 10 cm), biological rep 2GSE6893Expression data for reproductive development in rice
4.796.4GSM159208Seed (S1, 0 - 2 dap), biological rep 2GSE6893Expression data for reproductive development in rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.590991Os01g0622600CB642720-Calcium-dependent protein kinase2e-23At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)C.G.S.X.
0.172e-55218Os11g0136600AF319480.1-Calcium-dependent protein kinase (Fragment)5e-9At5g12180CPK17C.G.S.X.
0.167e-28127Os05g04919009633.m03864-Calcium-dependent protein kinase5e-15At5g19360CPK34C.G.S.X.
0.151e-26123Os01g0808400AK112112.1-Calcium-dependent protein kinase (Fragment)2e-8At5g19360CPK34C.G.S.X.
0.136e-22107Os12g01698009640.m00650-Calcium-dependent protein kinase SK5 (EC 2.7.1.-)(CDPK)2e-8At4g09570CPK4C.G.S.X.
0.123e-24115Os01g0832300AK058494.1-Calcium-dependent protein kinase5e-21At3g51850CPK13C.G.S.X.
0.097e-25117Os09g0514200AK100474.1--1e-3At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)C.G.S.X.
0.073e-24115Os12g0230200AK072981.1-Calcium-dependent protein kinase3e-4At5g19450CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.121e-1275Arabidopsis thalianaAt4g23650828465CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)Encodes calcium dependent protein kinase 3 (CPK3), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK3 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK6 is also a member of the Arabidopsis CDPK family.---C.G.S.X.
0.312e-61238Glycine maxGmaAffx.19969.1.S1_atBU926306--3e-10At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)C.G.S.X.
0.6101084Hordeum vulgareContig4593_atContig4593--9e-10At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)C.G.S.X.
0.126e-1583Populus trichocarpaPtpAffx.5895.1.S1_atCV230287calcium dependent protein kinase 22 /// calcium dependent protein kinase 3-8e-24At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)C.G.S.X.
0.411e-148527Triticum aestivumTa.3942.1.S1_a_atBJ255487--3e-9At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)C.G.S.X.
0.061e+034Vitis vinifera1618615_s_atCF211026--6e-104At3g51850CPK13C.G.S.X.
0.580813Zea maysZm.19155.1.S1_atCA401905calcium-dependent protein kinase, isoform 2-9e-29At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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