Gene omics information

Query gene ID	Os05g0582400
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.9	Os05g0582400	AK069254.1	-	Blast and wounding induced mitogen-activatedprotein kinase	6e-43	At1g53510	ATMPK18	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.53	71.3	Os01g0171800	AK067987.1	-	Conserved hypothetical protein	2e-1	At5g62960	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.44	58.1	Os02g0591900	AK060750.1	-	Conserved hypothetical protein	2e-5	At2g32850	protein kinase family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.42	53.9	Os03g0426800	AK099511.1	-	Ubiquitin domain containing protein	4e-4	At1g77870	MUB5 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 5 PRECURSOR)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.29	31.1	Os06g0607200	9634.m03888	-	Cellular retinaldehyde-binding/triple function,N-terminal domain containing protein	4e-11	At1g55840	SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.28	31.1	Os03g0191100	AK070661.1	-	Mitochondrial substrate carrier family protein	3e-4	At5g64970	mitochondrial substrate carrier family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.8	98.0	GSM174885	B FR13 3 dpi rep 1 with array type rice from Affymetrix	GSE7256	Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.2	97.9	GSM174888	C mock 3 dpi rep 2 with array type rice from Affymetrix	GSE7256	Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
8.7	97.8	GSM421686	XOC, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.6	97.8	GSM421726	MOCK, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.5	97.7	GSM421682	XOC, 24 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.0	97.6	GSM421681	XOC, 24 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.8	97.6	GSM421722	MOCK, 24 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.4	97.5	GSM421702	XOO, 24 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.3	97.5	GSM421683	XOC, 96 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.8	97.3	GSM421720	MOCK, 24 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.47	0	712	Os01g0629900	AK065930.1	-	Blast and wounding induced mitogen-activatedprotein kinase	5e-65	At3g14720	ATMPK19	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.29	2e-62	242	Os01g0665200	AK065342.1	-	Blast and wounding induced mitogen-activatedprotein kinase	2e-12	At3g14720	ATMPK19	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.24	5e-57	224	Os05g0566400	AK100389.1	-	Blast and wounding induced mitogen-activatedprotein kinase	2e-36	At3g14720	ATMPK19	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.21	1e-69	266	Os06g0367900	AK066968.1	-	Mitogen-activated protein kinase homologue	6e-61	At1g53510	ATMPK18	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.16	1e-33	147	Os06g0708000	AF194415.1	-	MAP kinase homolog	1e-68	At3g18040	MPK9 (MAP KINASE 9)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.25	6e-43	176	Arabidopsis thaliana	At1g53510	841786	ATMPK18	member of MAP Kinase	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.26	5e-44	180	Glycine max	GmaAffx.50094.1.S1_at	BU091503	-	-	7e-118	At5g19010	MPK16	C.G.	S.X.	Please select
0.42	0	789	Hordeum vulgare	Contig6092_at	Contig6092	-	-	2e-54	At2g42880	ATMPK20	C.G.	S.X.	Please select
0.23	2e-52	208	Populus trichocarpa	PtpAffx.135584.1.S1_at	CX175152	hypothetical protein	-	7e-137	At2g42880	ATMPK20	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.37	2e-163	577	Triticum aestivum	Ta.25413.1.A1_s_at	CK153790	-	-	4e-40	At2g42880	ATMPK20	C.G.	S.X.	Please select
0.04	4e-4	46	Vitis vinifera	1619722_at	CF213692	hypothetical protein LOC100246022	-	7e-26	At5g19010	MPK16	C.G.	S.X.	Please select
0.20	4e-45	182	Zea mays	Zm.2142.1.A1_at	CK369102	hypothetical protein LOC100191429	-	1e-8	At2g42880	ATMPK20	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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