CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0577700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.97 99.9 Os05g0577700 AK107217.1 - Protein kinase 1e-27 At3g01490 protein kinase, putative S.X. H.G.
0.43 55.4 Os04g0610000 AK060380.1 - Conserved hypothetical protein 1e+0 At5g10330 HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1) S.X. H.G.
0.42 53.9 Os03g0187100 AK060541.1 - Hypothetical protein 1e+0 At2g40316 unknown protein S.X. H.G.
0.33 38.8 Os06g0298400 AK066952.1 - WW/Rsp5/WWP domain containing protein 4e-7 At3g13225 protein binding S.X. H.G.
0.30 32.7 Os03g0802300 AK120564.1 - Hypothetical protein 3e-1 At5g61270 PIF7 (PHYTOCHROME-INTERACTING FACTOR7) S.X. H.G.
0.29 31.1 Os05g0533900 AK106477.1 - - 3e-3 At1g33360 ATP-dependent Clp protease ATP-binding subunit ClpX, putative S.X. H.G.
0.28 31.1 Os03g0138100 CB618243 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 1e-1 At2g33440 splicing factor family protein S.X. H.G.
0.27 27.5 Os02g0193500 AK101237.1 - Hypothetical protein 3e+0 At1g58242 unknown protein S.X. H.G.
0.26 25.6 Os05g0188600 AK111527.1 - Hypothetical protein 5e-1 At2g30010 - S.X. H.G.
0.26 25.6 Os03g0802800 AK059670.1 - Hypothetical protein 3e+0 At5g18540 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.2 98.0 GSM159183 Y Leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
9.0 97.8 GSM159185 Y Leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
8.4 97.7 GSM159271 Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
6.9 97.3 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
6.2 97.1 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
5.2 96.7 GSM195220 stigma 3, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
4.8 96.5 GSM159272 Rice coleoptiles, 4 days old, anoxic, REPLICATE 2 (Sample #12) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
4.7 96.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.6 96.3 GSM429983 Rice mutant phoenix (pho) panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
4.3 96.1 GSM302922 seedling_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.48 0 767 Os01g0641000 AK108130.1 - - 4e-15 At5g50000 protein kinase, putative C.G. S.X.
0.15 1e-16 89 Os03g0638800 CA767378 - Protein kinase domain containing protein 2e-32 At3g22750 protein kinase, putative C.G. S.X.
0.09 8e-9 63 Os03g0745700 9631.m05238 - ATMRK1 4e-2 At3g01490 protein kinase, putative C.G. S.X.
0.09 3e-8 61 Os12g0605900 AK109696.1 - Kinase like protein 2e-13 At4g14780 protein kinase, putative C.G. S.X.
0.01 3e-2 42 Os02g0553000 9630.m03316 - Protein kinase domain containing protein 1e-3 At4g08850 kinase C.G. S.X.
0.01 3e-2 42 Os11g0171800 AK111810.1 - Protein kinase domain containing protein 1e-1 At5g39390 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.01 1e-1 40 Os10g0119500 9638.m00205 - - 2e-5 At5g48740 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 1e-27 125 Arabidopsis thaliana At3g01490 821136 protein kinase, putative F:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA - - - C.G. S.X.
0.20 2e-21 105 Glycine max GmaAffx.68953.1.S1_at BU081135 - - 8e-46 At5g50000 protein kinase, putative C.G. S.X.
0.50 0 678 Hordeum vulgare Contig14415_at Contig14415 - - 4e-14 At3g01490 protein kinase, putative C.G. S.X.
0.37 1e-68 262 Populus trichocarpa PtpAffx.210558.1.S1_at pmrna20714 hypothetical protein - 2e-100 At5g50000 protein kinase, putative C.G. S.X.
0.29 5e-61 236 Triticum aestivum Ta.19532.1.S1_s_at CA653104 - - 3e-20 At5g50000 protein kinase, putative C.G. S.X.
0.17 3e-16 85 Vitis vinifera 1606647_at CF207759 hypothetical protein LOC100264779 - 6e-26 At4g14780 protein kinase, putative C.G. S.X.
0.59 0 932 Zea mays Zm.13996.1.S1_at AY107676.1 ATP binding protein - 3e-34 At5g50000 protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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