CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0576850

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os05g0576850 9633.m04714 - - 1e-1 At2g40510 40S ribosomal protein S26 (RPS26A) S.X. H.G.
0.86 96.4 Os08g0526201 9636.m04208 - - 8e-1 At2g17710 unknown protein S.X. H.G.
0.83 95.8 Os02g0491800 9630.m02768 - Germin-like protein 3 (Fragment) 6e-6 At3g04200 germin-like protein, putative S.X. H.G.
0.80 94.6 Os02g0237200 9630.m01320 - - 6e+0 At3g11745 unknown protein S.X. H.G.
0.71 89.6 Os04g0552900 9632.m04500 - - 3e-1 At4g30410 transcription factor S.X. H.G.
0.67 87.2 Os12g0584500 9640.m03852 - - 3e+1 At5g28730 unknown protein S.X. H.G.
0.67 87.2 Os04g0196800 9632.m01077 - - 2e+0 At5g17470 calmodulin-related protein, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
272.7 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
12.5 98.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.9 98.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.7 98.1 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.4 98.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2 97.9 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.8 97.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.7 97.8 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.4 97.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-3 44 Os05g0352700 CA759249 - Zn-finger, RING domain containing protein 7e+0 At5g14930 SAG101 (SENESCENCE-ASSOCIATED GENE 101) C.G. S.X.
0.02 9e-1 36 Os05g0520000 9633.m04143 - - 3e-2 At2g40510 40S ribosomal protein S26 (RPS26A) C.G. S.X.
0.01 1e-2 42 Os09g0487900 AK120902.1 - Basic helix-loop-helix dimerisation region bHLHdomain containing protein 2e-11 At2g42280 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.01 2e-1 38 Os09g0573000 AK073399.1 - TPR-like domain containing protein 1e-3 At4g21065 - C.G. S.X.
0.01 9e-1 36 Os06g0598800 AK101377.1 - Fatty acid elongase 1-like protein 1e-28 At5g43760 KCS20 (3-KETOACYL-COA SYNTHASE 20) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-1 38 Arabidopsis thaliana At2g40510 818646 40S ribosomal protein S26 (RPS26A) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic small ribosomal subunit, ribosome, chloroplast;MFOPA - - - C.G. S.X.
0.03 2e-1 38 Glycine max PsAffx.C16000070_at PsAffx.C16000070 - - 1e+0 At2g37260 TTG2 (TRANSPARENT TESTA GLABRA 2) C.G. S.X.
0.04 1e-2 40 Hordeum vulgare HM02O03r_s_at HM02O03r - - 6e-2 At3g60540 sec61beta family protein C.G. S.X.
0.03 1e-2 42 Populus trichocarpa PtpAffx.218716.1.S1_at pmrna34438 hypothetical protein - 1e+0 At5g20020 RAN2 C.G. S.X.
0.04 3e-2 40 Triticum aestivum Ta.28798.1.S1_x_at CD452943 - - 7e-8 At2g45070 SEC61 BETA C.G. S.X.
0.02 5e-1 34 Vitis vinifera 1615357_at BQ795685 - - 4e+0 At5g38800 AtbZIP43 (Arabidopsis thaliana basic leucine-zipper 43) C.G. S.X.
0.03 8e-1 34 Zea mays Zm.13589.1.A1_at AY107793.1 - - 1e+0 At3g04920 40S ribosomal protein S24 (RPS24A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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