Gene omics information

Query gene ID Os05g0557400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5371.3Os05g0557400AK069566.1-Membrane attack complexcomponent/perforin/complement C9 family protein3e-1At1g28380NSL1 (necrotic spotted lesions 1)S.X.H.G.
0.3644.0Os06g0673700AK066949.1--3e+0At5g59160TOPP2S.X.H.G.
0.1712.6Os06g0274500AK066417.1-SERK1 (Fragment)6e-6At2g23950leucine-rich repeat family protein / protein kinase family proteinS.X.H.G.
0.116.5Os01g0136800AK072170.1-Protein kinase domain containing protein2e-2At5g02070protein kinase-relatedS.X.H.G.
0.084.2Os07g0686500AK119424.1-Protein of unknown function DUF632 domaincontaining protein4e-1At4g35240unknown proteinS.X.H.G.
0.052.5Os06g0699200CF299882-Phosphoesterase At2g46880 family protein5e+0At3g08500MYB83 (myb domain protein 83)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.999.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.298.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.198.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.098.4GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.898.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.498.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.298.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.298.2GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.298.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.098.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-344Os02g0736300AK099700.1-Membrane attack complexcomponent/perforin/complement C9 family protein4e+0At5g15330SPX4 (SPX DOMAIN GENE 4)C.G.S.X.
0.026e-448Os02g0475300AK120516.1-Membrane attack complexcomponent/perforin/complement C9 family protein5e+0At5g08590SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1)C.G.S.X.
0.014e-242Os07g04873009635.m02984-Protein kinase family protein1e-3At4g21230protein kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-138Arabidopsis thalianaAt1g28380839735NSL1 (necrotic spotted lesions 1)This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots.---C.G.S.X.
0.023e-242Glycine maxHgAffx.19766.1.S1_atCB375606--6e-2At2g23320WRKY15C.G.S.X.
0.021e-552Hordeum vulgareContig9240_s_atContig9240--4e+0Atcg01310-C.G.S.X.
0.072e-965Populus trichocarpaPtpAffx.64085.1.S1_s_atDN486352hypothetical protein-1e-2At1g28380NSL1 (necrotic spotted lesions 1)C.G.S.X.
0.146e-55216Triticum aestivumTa.8608.1.A1_x_atBQ162121--4e+0At3g27590unknown proteinC.G.S.X.
0.019e-238Vitis vinifera1616828_s_atCD799685similar to Os03g0670700-1e+0At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
0.053e-859Zea maysZmAffx.449.1.A1_atAI677123--1e+1Atmg01120-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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