CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0557100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os05g0557100 9633.m04510 - Peptidase A1, pepsin family protein 7e-1 At3g44235 unknown protein S.X. H.G.
0.44 58.1 Os02g0786500 AK107467.1 - Pathogenesis-related protein 1 precursor (PR-1) 2e-3 At4g25790 allergen V5/Tpx-1-related family protein S.X. H.G.
0.25 24.1 Os02g0753400 9630.m05087 - Conserved hypothetical protein 5e-1 At4g11300 unknown protein S.X. H.G.
0.22 19.4 Os08g0532700 AK073978.1 - Peroxidase 55 precursor (EC 1.11.1.7) (AtperoxP55) (ATP20a) 4e-5 At5g58400 peroxidase, putative S.X. H.G.
0.21 17.9 Os07g0101800 9635.m00018 - - 2e-3 At5g06070 RBE (RABBIT EARS) S.X. H.G.
0.19 15.1 Os03g0127700 AK101081.1 - Protein kinase domain containing protein 2e-9 At1g62950 leucine-rich repeat transmembrane protein kinase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.6 99.1 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
14.3 98.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.9 98.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.6 98.4 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
10.4 98.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.0 98.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.0 98.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.0 97.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.8 97.6 GSM359919 Pokkali root, control, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
6.8 97.3 GSM359902 FL478 root, control, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.43 8e-67 256 Os01g0679500 NM_192039.1 - Peptidase A1, pepsin family protein 3e+0 At5g66815 unknown protein C.G. S.X.
0.04 4e-7 57 Os05g0596000 AK068911.1 - Peptidase aspartic family protein 6e-2 At5g40981 unknown protein C.G. S.X.
0.04 1e-4 50 Os02g0314600 AK068924.1 - Peptidase A1, pepsin family protein 1e+0 At5g55570 unknown protein C.G. S.X.
0.03 1e-7 59 Os08g0267300 AK105097.1 - Peptidase A1, pepsin family protein 9e-8 At5g23750 remorin family protein C.G. S.X.
0.03 6e-6 54 Os11g0184500 9639.m00765 - Nucellin (EC 3.4.23.-) 7e-1 At3g60540 sec61beta family protein C.G. S.X.
0.02 1e-4 50 Os02g0272000 9630.m01608 - - 6e-1 At5g18920 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-1 36 Arabidopsis thaliana At3g44235 823548 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.02 2e-2 42 Glycine max PsAffx.CL1498Contig1_at PsAffx.CL1498Contig1 - - 7e+0 At5g16250 unknown protein C.G. S.X.
0.06 4e-7 56 Hordeum vulgare Contig7684_at Contig7684 - - 1e-2 At5g13180 ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83) C.G. S.X.
0.02 7e-2 40 Populus trichocarpa PtpAffx.216275.1.S1_at pmrna30938 hypothetical protein - 3e+0 At5g55430 unknown protein C.G. S.X.
0.22 5e-39 163 Triticum aestivum Ta.17499.1.S1_at CA621319 - - 4e+0 At5g13250 unknown protein C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1620940_at CF201899.1 - - 2e+1 At5g66990 RWP-RK domain-containing protein C.G. S.X.
0.21 8e-42 171 Zea mays Zm.17822.1.A1_at CO521652 hypothetical protein LOC100193034 - 6e+0 At4g14104 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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