Gene omics information

Query gene ID Os05g0553000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os05g0553000AK071143.1-ATP synthase beta chain, mitochondrial precursor(EC 3.6.3.14)0At5g08670ATP binding / hydrogen ion transporting ATP synthase, rotational mechanismS.X.H.G.
0.8094.6Os01g0685800NM_192090.1-ATP synthase beta chain, mitochondrial precursor(EC 3.6.3.14)6e-156At5g08680ATP synthase beta chain, mitochondrial, putativeS.X.H.G.
0.6787.2Os01g0649100AF444195.1-Malate dehydrogenase1e-33At1g53240malate dehydrogenase (NAD), mitochondrialS.X.H.G.
0.6079.7Os05g0301700AK070578.1-Cytochrome c1 (Fragment)5e-79At3g27240cytochrome c1, putativeS.X.H.G.
0.6079.7Os07g0495200AK070990.1-ATP synthase delta' chain, mitochondrial precursor(EC 3.6.3.14)1e-1At5g47030ATP synthase delta' chain, mitochondrialS.X.H.G.
0.4458.1Os10g0320400AK072694.1-ATP synthase gamma chain, mitochondrial precursor(EC 3.6.3.14)1e-48At2g33040ATP synthase gamma chain, mitochondrial (ATPC)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.196.0GSM67059IR29 control replicate 2GSE3053Rice salt expression
3.695.5GSM67052FL478 control replicate 1GSE3053Rice salt expression
3.294.9GSM67053FL478 control replicate 2GSE3053Rice salt expression
3.194.8GSM1952305d-seedGSE7951Genome-wide gene expression profiling of rice stigma
3.194.8GSM67060IR29 salt stressed replicate 1GSE3053Rice salt expression
3.194.8GSM275413Azucena root tip_Buckled at the wax layer_rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.194.8GSM67057FL478 salt stressed replicate 3GSE3053Rice salt expression
3.094.6GSM67062IR29 salt stressed replicate 3GSE3053Rice salt expression
2.994.5GSM275414Azucena root tip_Before the wax layer_rep1GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
2.994.5GSM275415Azucena root tip_Before the wax layer_Rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7101021Os01g0685800NM_192090.1-ATP synthase beta chain, mitochondrial precursor(EC 3.6.3.14)6e-156At5g08680ATP synthase beta chain, mitochondrial, putativeC.G.S.X.
0.038e-344Os03g0385900AK072987.1-Mitochondrial ribosomal protein S11 (Nuclearencoded)3e+0At5g20700senescence-associated protein-relatedC.G.S.X.
0.013e-242Os04g0413900AK100104.1--2e-1At3g14480glycine/proline-rich proteinC.G.S.X.
0.013e-242Os05g0585900AK062575.1-Mitochondrial substrate carrier family protein1e-24At4g01100ADNT1 (ADENINE NUCLEOTIDE TRANSPORTER 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.500634Arabidopsis thalianaAt5g08670830768ATP binding / hydrogen ion transporting ATP synthase, rotational mechanismEncodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.---C.G.S.X.
0.440694Glycine maxGma.1312.1.S1_s_atBI969757--0At5g08680ATP synthase beta chain, mitochondrial, putativeC.G.S.X.
0.6701324Hordeum vulgareContig1956_s_atContig1956--1e-154At5g08680ATP synthase beta chain, mitochondrial, putativeC.G.S.X.
0.470728Populus trichocarpaPtp.6423.1.S1_s_atCV227334hypothetical protein /// mitochondrial beta subunit of F1 ATP synthase-0At5g08670ATP binding / hydrogen ion transporting ATP synthase, rotational mechanismC.G.S.X.
0.6301451Triticum aestivumTa.5.1.S1_atCK203655ATP synthase beta subunit-5e-151At5g08670ATP binding / hydrogen ion transporting ATP synthase, rotational mechanismC.G.S.X.
0.464e-173607Vitis vinifera1610327_atCB972987hypothetical protein LOC100259544-3e-160At5g08690ATP synthase beta chain 2, mitochondrialC.G.S.X.
0.6501752Zea maysZm.957.1.S1_a_atM36087.1mitochondrial F-1-ATPase subunit 2-2e-165At5g08670ATP binding / hydrogen ion transporting ATP synthase, rotational mechanismC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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