CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0544000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 76.3 Os05g0544000 9633.m04384 - - 2e+0 At2g05260 lipase class 3 family protein S.X. H.G.
0.71 89.6 Os04g0245300 9633.m01465 - - 3e+0 At3g54420 ATEP3 S.X. H.G.
0.63 82.7 Os09g0489800 AK119382.1 - Hypothetical protein 6e-3 At5g06950 AHBP-1B S.X. H.G.
0.56 76.3 Os04g0177000 9632.m00847 - Protein kinase domain containing protein 1e-4 At5g38250 serine/threonine protein kinase, putative S.X. H.G.
0.46 60.9 Os10g0114700 9638.m00157 - - 4e+0 At5g48945 LCR46 (Low-molecular-weight cysteine-rich 46) S.X. H.G.
0.27 27.5 Os12g0496700 9640.m03033 - - 2e-1 At3g50550 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
39.9 99.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
36.8 99.8 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
36.0 99.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.5 99.8 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.4 99.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.8 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.7 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.7 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.9 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.7 99.2 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-2 40 Os06g0568800 9634.m03546 - Hypothetical protein 5e+0 At3g58900 F-box family protein C.G. S.X.
0.02 2e-1 38 Os01g0502200 NM_193703.1 - - 3e-1 At3g14595 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At2g05260 815074 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;P - - - C.G. S.X.
0.03 2e+0 34 Glycine max HgAffx.3682.1.A1_at CK349008 - - 5e-2 At1g07135 glycine-rich protein C.G. S.X.
0.03 8e-1 34 Hordeum vulgare HVSMEc0003N15r2_s_at HVSMEc0003N15r2 - - 1e-2 At1g50250 FTSH1 (FtsH protease 1) C.G. S.X.
0.03 9e-3 42 Populus trichocarpa PtpAffx.108865.1.S1_at AJ780101 hypothetical protein - 1e+0 At3g17225 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.04 1e-1 38 Triticum aestivum TaAffx.105199.1.S1_at CA737925 - - 3e+0 At4g14660 NRPE7 C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1620955_at BQ800371 hypothetical protein LOC100244002 - 1e-1 At4g02670 AtIDD12 (Arabidopsis thaliana Indeterminate(ID)-Domain 12) C.G. S.X.
0.02 3e+0 32 Zea mays Zm.4489.1.A1_at AY108162.1 - - 1e-1 At5g40540 protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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