Gene omics information

Query gene ID	Os05g0527800
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.90	97.1	Os05g0527800	AK068336.1	-	The start codon is not identified.	6e-5	At5g17050	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.73	91.1	Os04g0305700	AK068128.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	2e-1	At2g43010	PIF4 (phytochrome interacting factor 4)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.69	87.9	Os01g0106300	AK119550.1	-	Isoflavone reductase homolog IRL (EC 1.3.1.-)	6e-1	At2g34200	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.67	87.2	Os02g0646500	AF148877.1	-	Aldehyde dehydrogenase domain containing protein	4e+0	At5g01830	armadillo/beta-catenin repeat family protein / U-box domain-containing protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.65	83.8	Os03g0832800	AK062843.1	-	Phospholipid/glycerol acyltransferase familyprotein	4e-2	At4g00400	GPAT8 (glycerol-3-phosphate acyltransferase 8)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.64	83.4	Os02g0590400	AK099196.1	-	Lecithin:cholesterol acyltransferase familyprotein	9e-1	At5g63480	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.62	81.5	Os06g0289900	CR280016	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	8e-1	At2g37950	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.61	81.2	Os04g0101400	AK100972.1	-	Cytochrome P450 family protein	1e-2	At5g06900	CYP93D1	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.60	79.7	Os06g0149100	AK099064.1	-	Lipolytic enzyme, G-D-S-L family protein	3e+0	At5g22810	GDSL-motif lipase, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.57	77.0	Os04g0454200	AK072059.1	-	Monosaccharide transporter 1	6e-2	At1g34580	monosaccharide transporter, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
29.9	99.7	GSM421724	MOCK, 96 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
27.7	99.6	GSM421704	XOO, 96 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
15.5	98.7	GSM421685	XOC, 96 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.8	98.6	GSM421705	XOO, 96 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.3	98.3	GSM421726	MOCK, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.0	98.3	GSM421725	MOCK, 96 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.7	98.2	GSM421682	XOC, 24 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.3	98.2	GSM421681	XOC, 24 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.8	98.1	GSM421677	XOC, 8 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.2	98.0	GSM421684	XOC, 96 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.44	6e-62	240	Os05g0527400	9633.m04220	-	Conserved hypothetical protein	2e+0	At1g31760	SWIB complex BAF60b domain-containing protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.37	4e-134	480	Os05g0527600	9633.m04222	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	7e-4	At1g73880	UGT89B1 (UDP-GLUCOSYL TRANSFERASE 89B1)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.34	3e-73	278	Os05g0527700	AK111246.1	-	Hypothetical protein	2e+0	At2g37200	integral membrane protein, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.26	2e-37	159	Os01g0869400	AK063342.1	-	The start codon is not identified.	3e-3	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.18	2e-43	178	Os01g0734800	AK102415.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	2e-4	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.13	1e-32	143	Os05g0527900	AK110876.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	8e-1	At3g21790	UDP-glucoronosyl/UDP-glucosyl transferase family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.10	2e-21	105	Os01g0734600	AK103129.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	1e-3	At1g70470	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-5	50	Arabidopsis thaliana	At5g17050	831568	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	8e-2	40	Glycine max	GmaAffx.56426.1.S1_at	CA783015	-	-	4e-3	At4g36770	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	C.G.	S.X.	Please select
0.16	1e-32	141	Hordeum vulgare	Contig25368_at	Contig25368	-	-	8e-2	At4g36770	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	C.G.	S.X.	Please select
0.02	8e-2	40	Populus trichocarpa	Ptp.1176.2.A1_at	CK089691	-	-	9e-8	At5g17050	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	4e-15	83	Triticum aestivum	Ta.21301.2.A1_x_at	CA638832	-	-	4e-3	At2g15490	UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4)	C.G.	S.X.	Please select
0.02	3e-1	36	Vitis vinifera	1611320_at	CF206248.1	hypothetical protein LOC100268157	-	2e-8	At3g16520	UDP-glucoronosyl/UDP-glucosyl transferase family protein	C.G.	S.X.	Please select
0.11	1e-4	48	Zea mays	Zm.16431.1.S1_at	CN844543	hypothetical protein LOC100274555	-	1e+0	At5g53880	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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