Gene omics information

Query gene ID Os05g0516400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.7Os05g0516400AK068854.1-Pistil-specific extensin-like protein familyprotein3e+0At3g03405-S.X.H.G.
0.5573.7Os08g0207300AK110728.1-Conserved hypothetical protein4e-1At4g21610LOL2 (LSD ONE LIKE 2)S.X.H.G.
0.3541.7Os03g0394750NM_192239.1--7e+0At5g64400-S.X.H.G.
0.3236.3Os12g06233009640.m04210--1e+0At5g16110unknown proteinS.X.H.G.
0.2219.4Os10g0520200NM_197388.1--2e-1At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)S.X.H.G.
0.2117.9Os01g0915300AK119435.1--1e+0At4g13250short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.399.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
36.299.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.299.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.899.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.399.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.699.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.599.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.499.5GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.999.4GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.999.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.212e-81305Os01g0750600NM_191238.1-Protein kinase domain containing protein4e-3At3g18810protein kinase family proteinC.G.S.X.
0.117e-29131Os10g0104800AK100339.1-Serine/threonine protein kinase family protein1e-15At1g49270protein kinase family proteinC.G.S.X.
0.097e-32141Os03g0568800AK070389.1-Protein kinase domain containing protein1e-6At1g10620protein kinase family proteinC.G.S.X.
0.067e-29131Os06g0486000AK100169.1-Protein kinase domain containing protein5e-3At1g23540protein kinase family proteinC.G.S.X.
0.033e-448Os03g06731009631.m04568-Homeotic protein knotted-1 (TKN1)2e-6At1g62360STM (SHOOT MERISTEMLESS)C.G.S.X.
0.031e-346Os12g0149000AK108734.1-Hypothetical protein4e-2At4g01895systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedC.G.S.X.
0.031e-346Os12g02409009640.m01336-Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)(S-adenosysl-L- methionine:caffeic acid3-O-methyltransferase) (COMT) (CAOMT)6e-2At5g23680sterile alpha motif (SAM) domain-containing proteinC.G.S.X.
0.022e-552Os03g07226009631.m05008-CAP protein family protein2e-17At4g34490ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1)C.G.S.X.
0.023e-448Os03g0819600AK061390.1-Chalcone isomerase (EC 5.5.1.6)2e+0At3g01516unknown proteinC.G.S.X.
0.021e-346Os12g0511100CB650219-Hypothetical protein4e-1At1g20875unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Arabidopsis thalianaAt3g03405821264-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.026e-240Glycine maxPsAffx.C2000023_atPsAffx.C2000023--2e-3At3g02540RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3)C.G.S.X.
0.048e-238Hordeum vulgareContig8002_atContig8002--3e-7At5g65207unknown proteinC.G.S.X.
0.031e-242Populus trichocarpaPtpAffx.43837.1.A1_s_atCV256587hypothetical protein-3e-6At4g24026unknown proteinC.G.S.X.
0.044e-240Triticum aestivumTaAffx.66213.1.S1_s_atCN009518--1e+0At2g33520-C.G.S.X.
0.022e-136Vitis vinifera1613120_atCF404918hypothetical LOC100248029-5e-3At1g18810phytochrome kinase substrate-relatedC.G.S.X.
0.022e-240Zea maysZm.14497.13.A1_a_atCB924237hypothetical protein LOC100273745-4e-19At1g07790HTB1C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage