CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0443900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.54 71.9 Os05g0443900 AK109520.1 - Basic leucine zipper protein (Liguleless2) 2e-4 At5g06839 bZIP family transcription factor S.X. H.G.
0.46 60.9 Os07g0674500 AK107802.1 - Conserved hypothetical protein 1e+0 At5g08060 unknown protein S.X. H.G.
0.36 44.0 Os03g0227700 9631.m01191 - Steroid 22-alpha-hydroxylase 5e-2 At1g70470 unknown protein S.X. H.G.
0.26 25.6 Os08g0562300 AK063290.1 - Zn-finger, C2H2 type domain containing protein 7e-4 At5g22890 zinc finger (C2H2 type) family protein S.X. H.G.
0.26 25.6 Os02g0636700 AK069779.1 - GRAM domain containing protein 2e-3 At5g23370 GRAM domain-containing protein / ABA-responsive protein-related S.X. H.G.
0.21 17.9 Os03g0133500 AK066406.1 - Adenosine monophosphate binding protein 1 AMPBP1 4e+0 At1g65880 BZO1 (BENZOYLOXYGLUCOSINOLATE 1) S.X. H.G.
0.19 15.1 Os02g0734800 AK109142.1 - Protein of unknown function DUF26 domaincontaining protein 1e-1 At5g18400 unknown protein S.X. H.G.
0.19 15.1 Os07g0546200 AK067303.1 - Conserved hypothetical protein 1e+0 At3g04640 glycine-rich protein S.X. H.G.
0.18 13.7 Os01g0588400 AK107346.1 - Band 7 protein family protein 9e-3 At1g75550 glycine-rich protein S.X. H.G.
0.17 12.6 Os06g0239500 AK064959.1 - TGF-beta receptor, type I/II extracellular regionfamily protein 6e-2 At1g72600 hydroxyproline-rich glycoprotein family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
57.0 99.9 GSM149411 Rice Bala 0ppm Arsenate (Control) Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
29.6 99.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
19.5 99.1 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
19.2 99.0 GSM431930 Root- +Fe-P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
18.3 98.9 GSM431929 Root- +Fe-P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
12.9 98.4 GSM431926 Root- +Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
8.2 97.7 GSM431931 Root- -Fe-P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
8.0 97.6 GSM431925 Root- +Fe+P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
6.6 97.3 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.2 97.1 GSM431932 Root- -Fe-P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.42 1e-44 182 Os01g0859500 AK101338.1 - Ocs-element binding factor 3.2 3e-4 At5g07600 oleosin / glycine-rich protein C.G. S.X.
0.06 2e-15 85 Os12g0152900 AK101620.1 - Basic-leucine zipper (bZIP) transcription factordomain containing protein 5e-3 At1g08320 bZIP family transcription factor C.G. S.X.
0.04 4e-26 121 Os01g0859400 AK072832.1 - Dual specificity protein phosphatase familyprotein 1e-1 At5g65210 TGA1 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-4 48 Arabidopsis thaliana At5g06839 830575 bZIP family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF - - - C.G. S.X.
0.04 2e-12 75 Glycine max GmaAffx.79390.2.S1_at AW597383 transcription factor bZIP91 - 2e-21 At1g08320 bZIP family transcription factor C.G. S.X.
0.03 4e-1 36 Hordeum vulgare Contig11819_s_at Contig11819 - - 3e-3 At1g08320 bZIP family transcription factor C.G. S.X.
0.08 6e-6 54 Populus trichocarpa PtpAffx.213306.1.S1_at pmrna26027 hypothetical protein - 8e-18 At5g06839 bZIP family transcription factor C.G. S.X.
0.02 2e-2 42 Triticum aestivum Ta.30815.1.S1_at CN008284 - - 7e-1 At2g48100 exonuclease family protein C.G. S.X.
0.01 7e-2 38 Vitis vinifera 1614868_at CB920940 hypothetical protein LOC100266097 - 4e-1 At3g29034 unknown protein C.G. S.X.
0.38 1e-72 274 Zea mays Zm.16855.1.A1_at AF036949.1 liguleless2 - 1e-3 At5g06950 AHBP-1B C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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