CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0441400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.48 63.7 Os05g0441400 AK108756.1 - Uncharacterized plant-specific domain containingprotein 2e+0 At2g31035 - S.X. H.G.
0.67 87.2 Os10g0551700 AK107851.1 - Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein 7e-3 At2g35960 NHL12 S.X. H.G.
0.63 82.7 Os10g0150300 BI805240 - Protein of unknown function DUF1210 family protein 2e+0 At5g17840 chaperone protein dnaJ-related S.X. H.G.
0.61 81.2 Os09g0414500 AK058840.1 - ZF-HD homeobox protein 5e-3 At3g28917 MIF2 (MINI ZINC FINGER 2) S.X. H.G.
0.60 79.7 Os02g0816200 AK060243.1 - Lipolytic enzyme, G-D-S-L family protein 2e-4 At3g04290 LTL1 (LI-TOLERANT LIPASE 1) S.X. H.G.
0.37 45.0 Os07g0565800 AK062834.1 - Conserved hypothetical protein 2e+0 At3g25577 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.4 98.7 GSM99879 TCHW P21_ir29 control, biological rep3 GSE4438 Expression data from rice under salinity stress
14.0 98.5 GSM99878 TCHW P20_ir29 control, biological rep2 GSE4438 Expression data from rice under salinity stress
12.3 98.3 GSM99877 TCHW P19_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
12.0 98.3 GSM99881 TCHW P23_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
11.2 98.2 GSM99882 TCHW P24_ir29 salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
9.5 97.9 GSM99864 TCHW P7_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
9.5 97.9 GSM304654 Mutant stable line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
9.0 97.8 GSM99860 TCHW P3_m103 control, biological rep3 GSE4438 Expression data from rice under salinity stress
8.9 97.8 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
8.7 97.8 GSM99880 TCHW P22_ir29 salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 3e-35 151 Os01g0863800 9629.m06379 - Uncharacterized plant-specific domain containingprotein 1e+0 At1g69210 unknown protein C.G. S.X.
0.07 2e-5 52 Os11g0156300 AK107140.1 - Uncharacterized plant-specific domain containingprotein 1e-2 At5g57070 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.05 1e-3 46 Os04g0685000 AK109189.1 - Uncharacterized plant-specific domain containingprotein 5e-7 At5g04820 OFP13 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13) C.G. S.X.
0.02 4e-3 44 Os08g0517800 9636.m04110 - Thaumatin, pathogenesis-related family protein 6e-4 At4g38670 pathogenesis-related thaumatin family protein C.G. S.X.
0.01 1e-3 46 Os05g0127300 AK106429.1 - Cytokinin-regulated kinase 1 2e-2 At1g78980 SRF5 (STRUBBELIG-RECEPTOR FAMILY 5) C.G. S.X.
0.01 2e-2 42 Os10g0496000 AK109091.1 - The start codon is not identified. 2e-7 At2g28810 Dof-type zinc finger domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At2g31035 817655 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 8e-1 36 Glycine max PsAffx.CL931Contig1_at PsAffx.CL931Contig1 - - 3e-1 At2g36450 HRD (HARDY) C.G. S.X.
0.03 7e-2 38 Hordeum vulgare HO09C11S_at HO09C11S - - 2e-1 At3g29330 unknown protein C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.1205.2.S1_at DN496820 - - 1e-3 At5g02020 unknown protein C.G. S.X.
0.04 9e-3 42 Triticum aestivum TaAffx.113049.1.S1_at CA618527 - - 1e+0 At1g75550 glycine-rich protein C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1622464_at BQ796673 hypothetical protein LOC100260728 - 3e-40 At5g54770 THI1 C.G. S.X.
0.03 4e-3 42 Zea mays ZmAffx.1116.1.S1_at AI670638 - - 5e+0 At5g55570 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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