CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0439750

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.2 Os05g0439750 9633.m03398 - - 1e-2 At2g41380 embryo-abundant protein-related S.X. H.G.
0.80 94.6 Os11g0662900 9639.m04087 - - 2e+0 At1g76820 GTP binding / GTPase S.X. H.G.
0.71 89.6 Os06g0538501 9634.m03282 - - 4e+0 At3g09900 ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E) S.X. H.G.
0.67 87.2 Os06g0365400 9634.m02577 - - 3e+0 At3g32160 unknown protein S.X. H.G.
0.60 79.7 Os03g0256500 9631.m01458 - Conserved hypothetical protein 9e+0 Atmg01060 - S.X. H.G.
0.60 79.7 Os08g0295201 9636.m01953 - - 3e+0 At1g24577 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
146.1 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
83.2 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
20.9 99.2 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.7 98.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.2 98.7 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.0 98.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.0 98.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.6 98.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.5 98.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.5 98.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 1e-41 171 Os03g0231700 AK068401.1 - Squalene monooxygenase 2 (EC 1.14.99.7) 1e-19 At1g58440 XF1 C.G. S.X.
0.04 5e-1 36 Os02g0249300 9630.m01412 - Zn-finger, RING domain containing protein 1e+0 At2g01610 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.02 1e-1 38 Os02g0564400 BI812922 - ATP-dependent Clp protease ATP-binding subunitClpX-like, mitochondrial precursor 2e-42 At5g53350 CLPX C.G. S.X.
0.01 1e-1 38 Os09g0445700 9637.m02397 - AAA ATPase, central region domain containingprotein 2e-2 At4g25835 AAA-type ATPase family protein C.G. S.X.
0.01 5e-1 36 Os01g0299300 NM_189183.1 - Phospholipid/glycerol acyltransferase familyprotein 3e-4 At1g01610 GPAT4 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4) C.G. S.X.
0.01 5e-1 36 Os08g0513600 9636.m04072 - Conserved hypothetical protein 2e+0 At5g14690 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-2 40 Arabidopsis thaliana At2g41380 818736 embryo-abundant protein-related F:methyltransferase activity;P:response to cadmium ion;C:mitochondrion;BPFOMA - - - C.G. S.X.
0.03 1e+0 34 Glycine max PsAffx.psMA004xN20f_at PsAffx.psMA004xN20f - - 5e+0 At5g08290 YLS8 C.G. S.X.
0.05 2e+0 32 Hordeum vulgare HV_CEa0006E02r2_s_at HV_CEa0006E02r2 - - 4e+0 At3g06020 unknown protein C.G. S.X.
0.04 5e+0 32 Populus trichocarpa PtpAffx.212130.1.S1_x_at pmrna23790 hypothetical protein - 6e-1 At3g13677 unknown protein C.G. S.X.
0.03 3e-1 36 Triticum aestivum TaAffx.37674.1.S1_at BJ269380 - - 4e+0 At3g29036 unknown protein C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1610640_at CD798873 - - 1e+0 At5g27820 ribosomal protein L18 family protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.16172.1.S1_at CF637681 hypothetical protein LOC100277357 - 1e+0 At2g21060 ATGRP2B (GLYCINE-RICH PROTEIN 2B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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