CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0411300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.72 89.8 Os05g0411300 AK073142.1 - Conserved hypothetical protein 1e-3 At3g56660 BZIP49 (BASIC REGION/LEUCINE ZIPPER MOTIF PROTEIN 49) S.X. H.G.
0.61 81.2 Os03g0278300 AK071965.1 - Transcriptional coactivator-like protein 6e-12 At5g02530 RNA and export factor-binding protein, putative S.X. H.G.
0.41 52.4 Os03g0280000 AK120269.1 - ABC transporter, transmembrane region domaincontaining protein 2e-72 At3g55320 PGP20 (P-GLYCOPROTEIN 20) S.X. H.G.
0.40 51.1 Os03g0274000 AK060769.1 - Oxysterol-binding protein family protein 1e-24 At5g02100 UNE18 (UNFERTILIZED EMBRYO SAC 18) S.X. H.G.
0.38 46.9 Os03g0756200 AK111668.1 - Protein kinase domain containing protein 1e-17 At3g02130 RPK2 (RECEPTOR-LIKE PROTEIN KINASE 2) S.X. H.G.
0.36 44.0 Os01g0911100 AK062123.1 - ATP-dependent RNA helicase-like protein 1e-17 At5g63120 ethylene-responsive DEAD box RNA helicase, putative (RH30) S.X. H.G.
0.36 44.0 Os02g0601800 AK121891.1 - Bromodomain containing protein 3e-2 At2g22080 unknown protein S.X. H.G.
0.36 44.0 Os01g0510100 CB656690 - MAP kinase kinase 1 5e-30 At5g56580 MKK6 (MAP KINASE KINASE 6) S.X. H.G.
0.35 41.7 Os01g0556400 CB657305 - Heat shock protein DnaJ family protein 4e-3 At5g05750 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.31 34.5 Os04g0609600 AK070129.1 - Protein phosphatase type 2C 3e-3 At5g27930 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.9 98.1 GSM159184 Y Leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
8.8 97.8 GSM159183 Y Leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
8.5 97.7 GSM154951 Leaf_DMSO-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
7.9 97.6 GSM154952 Leaf_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
7.8 97.6 GSM154946 Leaf_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
7.4 97.5 GSM154945 Leaf_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
7.2 97.4 GSM154953 Leaf_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
6.8 97.3 GSM154947 Leaf_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
6.5 97.2 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
6.2 97.1 GSM154954 Leaf_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 1e-20 103 Os07g0644100 AK121898.1 - Basic-leucine zipper (bZIP) transcription factordomain containing protein 1e-3 At2g40950 BZIP17 C.G. S.X.
0.01 1e-2 44 Os01g0869900 AB125305.1 - Protein kinase 3 4e-18 At5g63650 SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5) C.G. S.X.
0.01 1e-2 44 Os07g0694800 AK065595.1 - Protein of unknown function DUF155 family protein 3e-28 At5g13610 unknown protein C.G. S.X.
0.01 4e-2 42 Os03g0229100 9631.m01202 - - 3e+0 At5g52750 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 4e-2 42 Os06g0521825 9634.m03098 - - 8e-2 At5g65609 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-3 46 Arabidopsis thaliana At3g56660 824833 BZIP49 (BASIC REGION/LEUCINE ZIPPER MOTIF PROTEIN 49) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPFO - - - C.G. S.X.
0.02 1e-1 40 Glycine max PsAffx.CL2237Contig1_at PsAffx.CL2237Contig1 - - 5e+0 Atcg00750 - C.G. S.X.
0.52 9e-142 504 Hordeum vulgare Contig7652_s_at Contig7652 - - 3e-3 At3g56660 BZIP49 (BASIC REGION/LEUCINE ZIPPER MOTIF PROTEIN 49) C.G. S.X.
0.01 3e-2 42 Populus trichocarpa PtpAffx.26433.1.S1_at BU818774 hypothetical protein - 2e-3 At2g16050 - C.G. S.X.
0.48 1e-108 395 Triticum aestivum Ta.6443.2.S1_at BJ305881 - - 4e-9 At3g56660 BZIP49 (BASIC REGION/LEUCINE ZIPPER MOTIF PROTEIN 49) C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1615768_at CB836350 - - 5e+0 At5g04030 unknown protein C.G. S.X.
0.04 7e-16 85 Zea mays Zm.2629.1.S1_at AW066589 DNA binding protein - 1e-2 At2g40950 BZIP17 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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