Gene omics information

Query gene ID Os05g0399400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.2Os05g0399400L37289.1-Chitinase (EC 3.2.1.14)4e-2At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)S.X.H.G.
0.4458.1Os11g0306400AK106179.1-O-methyltransferase, family 2 domain containingprotein2e-1At3g16190isochorismatase hydrolase family proteinS.X.H.G.
0.3644.0Os06g0302000AK106070.1-Hypothetical protein3e+0At1g06475unknown proteinS.X.H.G.
0.2117.9Os09g0491100AY056828.1-Beta-primeverosidase (EC 3.2.1.149)9e-1At3g60120BGLU27 (BETA GLUCOSIDASE 27)S.X.H.G.
0.1915.1Os11g03073009639.m01888-Herbicide safener binding protein6e-1At3g16190isochorismatase hydrolase family proteinS.X.H.G.
0.116.5Os04g05211009632.m04226-Plasma membrane intrinsic protein (Aquaporin)1e-42At2g37170PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)S.X.H.G.
0.031.4Os05g0226900AF337054.1-Conserved hypothetical protein3e-3At2g43970La domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
88.5100.0GSM99862TCHW P5_m103 salt stress, biological rep2GSE4438Expression data from rice under salinity stress
67.599.9GSM262000IAC165, 2 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
44.499.9GSM99861TCHW P4_m103 salt stress, biological rep1GSE4438Expression data from rice under salinity stress
33.299.8GSM262005IAC165, 4 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
27.999.6GSM262003IAC165, 4 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
22.199.3GSM262004IAC165, 4 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
20.999.2GSM99863TCHW P6_m103 salt stress, biological rep3GSE4438Expression data from rice under salinity stress
18.098.9GSM387556Transgenic line 4, biological rep. 1GSE15448Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
14.798.6GSM261998IAC165, 2 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
8.797.8GSM99881TCHW P23_ir29 salt stress, biological rep2GSE4438Expression data from rice under salinity stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.532e-76287Os06g0726100Z29962.1-Endochitinase precursor (EC 3.2.1.14)1e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.482e-54214Os06g0726200AK061042.1-Endochitinase precursor (EC 3.2.1.14)2e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.351e-31139Os05g0399700AB012855.1-Chitinase (EC 3.2.1.14)3e+0At5g25940early nodulin-relatedC.G.S.X.
0.263e-29131Os01g0287600AK063062.1-Chitinase (Class II) (EC 3.2.1.14)3e-2At3g54420ATEP3C.G.S.X.
0.183e-1791Os05g0138200AK110261.1-Chitinase (Class II) (EC 3.2.1.14)2e-3At3g54420ATEP3C.G.S.X.
0.164e-1997Os10g0542900BM038035-Chitinase (EC 3.2.1.14) (Fragment)3e-5At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.074e-240Arabidopsis thalianaAt3g12500820429ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.---C.G.S.X.
0.081e-656Glycine maxGmaAffx.29692.2.S1_atAI437572--8e-1At1g24260SEP3 (SEPALLATA3)C.G.S.X.
0.509e-48190Hordeum vulgareContig7001_atContig7001--2e-1At1g02360chitinase, putativeC.G.S.X.
0.059e-136Populus trichocarpaPtpAffx.77318.2.S1_atCX658035hypothetical protein-5e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.492e-56220Triticum aestivumTa.2783.1.S1_atAB029935.1chitinase 2-2e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.078e-444Vitis vinifera1608262_atAF053341.1class I extracellular chitinase-2e+0At3g04180germin-like protein, putativeC.G.S.X.
0.412e-30133Zea maysZm.11654.1.A1_atCK347373hypothetical protein LOC100280135-1e-5At3g54420ATEP3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0051707A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.
CGO:0006032The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues.
CGO:0016998The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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