CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0381700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 73.7 Os05g0381700 CF303005 - Conserved hypothetical protein 5e-1 At1g06960 small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative S.X. H.G.
0.38 46.9 Os12g0226300 9640.m01201 - Allyl alcohol dehydrogenase 4e+0 At5g01910 unknown protein S.X. H.G.
0.36 44.0 Os06g0732000 9634.m05020 - Ribosomal protein L29 family protein 2e-9 At5g02610 60S ribosomal protein L35 (RPL35D) S.X. H.G.
0.36 44.0 Os04g0423100 9632.m03324 - Aromatic-ring hydroxylase family protein 5e-1 At5g16380 unknown protein S.X. H.G.
0.31 34.5 Os10g0382600 AK106391.1 - Hypothetical protein 1e+1 At5g15581 unknown protein S.X. H.G.
0.06 3.0 Os10g0370400 AK067524.1 - Disease resistance protein family protein 5e-1 At5g05230 ubiquitin-protein ligase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
117.0 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
91.6 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
12.6 98.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.6 98.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.4 98.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.3 98.1 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2 97.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.1 97.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-9 65 Os01g0950700 AK107123.1 - Hypothetical protein 6e-5 At3g54570 calmodulin-binding protein-related C.G. S.X.
0.03 4e-3 44 Os09g0338000 9637.m01421 - - 9e+0 At5g65430 GRF8 (GENERAL REGULATORY FACTOR 8) C.G. S.X.
0.02 6e-2 38 Os06g0542200 AK058589.1 - Prephenate dehydrogenase domain containing protein 2e-1 At3g62670 ARR20 (ARABIDOPSIS RESPONSE REGULATOR 20) C.G. S.X.
0.02 3e-1 36 Os03g0598600 NM_184792.1 - FAR1 domain containing protein 6e-2 At1g16810 unknown protein C.G. S.X.
0.02 3e-1 36 Os06g0300000 AK109790.1 - Short-chain dehydrogenase/reductase SDR familyprotein 7e-1 At3g27280 ATPHB4 (PROHIBITIN 4) C.G. S.X.
0.02 1e+0 34 Os01g0747500 AK122010.1 - Dihydroorotase, mitochondrial precursor (EC3.5.2.3) (DHOase) 1e-12 At4g22930 PYR4 (PYRIMIDIN 4) C.G. S.X.
0.02 4e+0 32 Os02g0789100 CR280795 - Cyclic nucleotide-binding domain containingprotein 9e-1 At3g30260 AGL79 (AGAMOUS-LIKE 79) C.G. S.X.
0.01 1e-3 46 Os06g0296900 9634.m01864 - - 2e+0 At5g56520 unknown protein C.G. S.X.
0.01 4e-3 44 Os02g0556000 9630.m03338 - Glycosyl transferase, family 8 protein 2e-5 At3g18660 PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) C.G. S.X.
0.01 4e-3 44 Os03g0752000 AK121199.1 - Conserved hypothetical protein 2e+0 At5g48670 AGL80 (AGAMOUS-LIKE 80) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-1 34 Arabidopsis thaliana At1g06960 837206 small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MFOPBV - - - C.G. S.X.
0.06 3e+0 32 Glycine max GmaAffx.30250.1.S1_at AW458395 - - 9e+0 At5g64342 CPuORF39 (Conserved peptide upstream open reading frame 39) C.G. S.X.
0.04 2e-1 34 Hordeum vulgare Contig17639_at Contig17639 - - 9e-1 At1g12423 unknown protein C.G. S.X.
0.05 2e-1 36 Populus trichocarpa PtpAffx.224929.1.S1_at pmrna43860 BED finger-nbs-lrr resistance protein - 3e-1 At3g50500 SNRK2.2 (SNF1-RELATED PROTEIN KINASE 2.2) C.G. S.X.
0.05 2e+0 32 Triticum aestivum TaAffx.36405.1.A1_x_at BQ237961 - - 3e+0 At5g51520 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.07 6e-1 32 Vitis vinifera 1622241_x_at CF205868.1 - - 4e-1 At2g22155 - C.G. S.X.
0.04 9e-1 32 Zea mays Zm.3712.1.S1_at AW506785 Hypothetical protein LOC100216583 - 6e-2 At1g69430 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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